RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 C2CD4DB7Z1M9 353 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 PROB1E7EW31 1015 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 PES1O00541 588 aaKnown RBP11.29□□□□□ -0.6
PTCH1-225ENST00000551845 TRIM66O15016 1216 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 CSH1P0DML2 217 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 CSH2P0DML3 217 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 LAMP2P13473 410 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 ANXA13P27216 316 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 MYL5Q02045 173 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 ANO6Q4KMQ2 910 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 ZNF394Q53GI3 561 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 TCP11X2Q5H9J9 407 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 GET4Q7L5D6 327 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-225ENST00000551845 HS6ST3Q8IZP7 471 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 PPM1KQ8N3J5 372 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 CYFIP2Q96F07 1278 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 ASIC4Q96FT7 647 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 TMEM176AQ96HP8 235 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 FAM81BQ96LP2 452 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 LPIN3Q9BQK8 851 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 B3GNT5Q9BYG0 378 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 GPR88Q9GZN0 384 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 ELOVL4Q9GZR5 314 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 EHD2Q9NZN4 543 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 CDH7Q9ULB5 785 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 ATP8B3O60423 1300 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 USP34Q70CQ2 3546 aa11.29□□□□□ -0.6
PTCH1-225ENST00000551845 GTPBP10A4D1E9 387 aaKnown RBP11.28□□□□□ -0.6
PTCH1-225ENST00000551845 BECN2A8MW95 431 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 GALR2O43603 387 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-225ENST00000551845 ATF6P18850 670 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 SLC9A1P19634 815 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 GPR15P49685 360 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 ZNF165P49910 485 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 NUBP1P53384 320 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 EPHA5P54756 1037 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 GCNT1Q02742 428 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 PTPN21Q16825 1174 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 EXOC3L4Q17RC7 722 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 SDHAF4Q5VUM1 108 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 RRAGAQ7L523 313 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 C12orf29Q8N999 325 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 ITFG1Q8TB96 612 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 GPR152Q8TDT2 470 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 WHAMMQ8TF30 809 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 FGF13Q92913 245 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 NXPE3Q969Y0 559 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 MCRS1Q96EZ8 462 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 SPATA17Q96L03 361 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 C8orf48Q96LL4 319 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 HNRNPABQ99729 332 aaKnown RBP11.28□□□□□ -0.6
PTCH1-225ENST00000551845 BPIFA3Q9BQP9 254 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 CRACR2AQ9BSW2 395 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 ZNF518BQ9C0D4 1074 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 INTS2Q9H0H0 1204 aaKnown RBP11.28□□□□□ -0.6
PTCH1-225ENST00000551845 ATXN3LQ9H3M9 355 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 UBE2TQ9NPD8 197 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-225ENST00000551845 GDE1Q9NZC3 331 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 GCNT4Q9P109 453 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 EPS15L1Q9UBC2 864 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 UXTQ9UBK9 157 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-225ENST00000551845 KIAA1257Q9ULG3 409 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 MAGED2Q9UNF1 606 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-225ENST00000551845 PCDHB4Q9Y5E5 795 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 SCN1AP35498 2009 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 C5orf42Q9H799 3197 aa11.28□□□□□ -0.6
PTCH1-225ENST00000551845 LRRC10BA6NIK2 292 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 SLC38A8A6NNN8 435 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 F8VP50 259 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 CLDN5O00501 218 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 CAVIN2O95810 425 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 PDGFBP01127 241 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-225ENST00000551845 GABRR2P28476 465 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 CDC25CP30307 473 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 RAD23BP54727 409 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 MFAP3P55082 362 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 ORC1Q13415 861 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 NFKBIBQ15653 356 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 CCDC142Q17RM4 750 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 ARHGAP15Q53QZ3 475 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 PRSS36Q5K4E3 855 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 CDKAL1Q5VV42 579 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 PHLDB3Q6NSJ2 640 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 DENND5BQ6ZUT9 1274 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 PAQR9Q6ZVX9 377 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 ENOSF1Q7L5Y1 443 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 SLC2A14Q8TDB8 520 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 JAKMIP2Q96AA8 810 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 SMARCD1Q96GM5 515 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 GCNAQ96QF7 691 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 TWNKQ96RR1 684 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 MYADMQ96S97 322 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 ARID3AQ99856 593 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 LRRC3Q9BY71 257 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 VPS16Q9H269 839 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 FAM49BQ9NUQ9 324 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 IGSF9Q9P2J2 1179 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 HMGXB4Q9UGU5 601 aa11.27□□□□□ -0.61
PTCH1-225ENST00000551845 A0A1W2PRU2 124 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 AP1G2O75843 785 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms