RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 CCDC154A6NI56 674 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 FAM171A2A8MVW0 826 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 HTRA2O43464 458 aaPredicted RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 PHF2O75151 1096 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 PGK2P07205 417 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 LDHCP07864 332 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 UBTFL1P0CB47 393 aaPredicted RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 MYOGP15173 224 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 CSF2RAP15509 400 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 EDNRBP24530 442 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 HOXC8P31273 242 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 THBS2P35442 1172 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 ADCY8P40145 1251 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 LIMS1P48059 325 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 MEOX1P50221 254 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 ACLYP53396 1101 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 GJA9P57773 515 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 SESN2P58004 480 aaPredicted RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 ANTXR2P58335 489 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 PURAQ00577 322 aaKnown RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 TFF2Q03403 129 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 SMAD4Q13485 552 aaKnown RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 BIRC2Q13490 618 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 MVPQ14764 893 aaKnown RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 BRD3Q15059 726 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 NOMO1Q15155 1222 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 KCNA10Q16322 511 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 TRIM71Q2Q1W2 868 aaKnown RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 PGS1Q32NB8 556 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 CCDC157Q569K6 752 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 C12orf60Q5U649 245 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 ANO1Q5XXA6 986 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 SPTY2D1Q68D10 685 aaPredicted RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 CEP85Q6P2H3 762 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 CTR9Q6PD62 1173 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 LILRA6Q6PI73 481 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 ZNF365Q70YC5 407 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 GAREM2Q75VX8 874 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 IGDCC3Q8IVU1 814 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 TEX11Q8IYF3 940 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 GRAMD1CQ8IYS0 662 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 PRR18Q8N4B5 295 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 TMEM57Q8N5G2 664 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 MSL3Q8N5Y2 521 aaKnown RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 LINC00482Q8N8I6 264 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 GLB1L3Q8NCI6 653 aaPredicted RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 GPR156Q8NFN8 814 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 RIN2Q8WYP3 895 aaPredicted RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 ANKS1AQ92625 1134 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 HDAC10Q969S8 669 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 GFM2Q969S9 779 aaKnown RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 MVB12AQ96EY5 273 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 DYNLL2Q96FJ2 89 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 WDR92Q96MX6 357 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 NOX5Q96PH1 765 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 UIMC1Q96RL1 719 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 C7orf25Q9BPX7 421 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 LRFN3Q9BTN0 628 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 SGPP1Q9BX95 441 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 OSBPL6Q9BZF3 934 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 VCPKMTQ9H867 229 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 FAM204AQ9H8W3 233 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 L2HGDHQ9H9P8 463 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 RBM12Q9NTZ6 932 aaKnown RBP2.79□□□□□ -1.96
CPSF6-207ENST00000551516 ABCF2Q9UG63 623 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 DNAI1Q9UI46 699 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 CDC42EP3Q9UKI2 254 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 IRAK3Q9Y616 596 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 MTCH2Q9Y6C9 303 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 SPTBN4Q9H254 2564 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 NCOR2Q9Y618 2525 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 CFAP47Q6ZTR5 3102 aa2.79□□□□□ -1.96
CPSF6-207ENST00000551516 ZDBF2Q9HCK1 2354 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 PI4K2BG5E9Z4 385 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 TPD52L2O43399 206 aaKnown RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 AKR1B10O60218 316 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 DUSP11O75319 330 aaKnown RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 SEC24DO94855 1032 aaPredicted RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 ENDOD1O94919 500 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 KNG1P01042 644 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 CELA3BP08861 270 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 CLTBP09497 229 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 LTA4HP09960 611 aaKnown RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 UQCRFS1P1P0C7P4 283 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 ARP10275 920 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 IGFBP6P24592 240 aaPredicted RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 WASP42768 502 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 STAT5BP51692 787 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 KCNQ1P51787 676 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 EPHB3P54753 998 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 PER3P56645 1201 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 DLG4P78352 724 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 IRX3P78415 501 aaPredicted RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 MEF2AQ02078 507 aaPredicted RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 CNTN2Q02246 1040 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 CD69Q07108 199 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 ZNF267Q14586 743 aaPredicted RBP2.78□□□□□ -1.96
CPSF6-207ENST00000551516 GRM3Q14832 879 aa2.78□□□□□ -1.96
CPSF6-207ENST00000551516 EIF4HQ15056 248 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms