RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ZNF252P-AS1Q0IIN9 211 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 ACVR2BQ13705 512 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 GRB14Q14449 540 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 OASLQ15646 514 aaKnown RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 KYNUQ16719 465 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 KLHL38Q2WGJ6 581 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 FAM102AQ5T9C2 384 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 NOTUMQ6P988 496 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 DLK2Q6UY11 383 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 ILDR2Q71H61 639 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 CATSPER4Q7RTX7 472 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 GPR142Q7Z601 462 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 RFX6Q8HWS3 928 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 CCDC13Q8IYE1 715 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 C2orf69Q8N8R5 385 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 CEP120Q8N960 986 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 CMASQ8NFW8 434 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 TEKT4Q8WW24 435 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 ATXN2LQ8WWM7 1075 aaKnown RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 USP6NLQ92738 828 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 SEC16BQ96JE7 1060 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 ZNF560Q96MR9 790 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 TINF2Q9BSI4 451 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 ELOVL4Q9GZR5 314 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 SMYD3Q9H7B4 428 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 ZWILCHQ9H900 591 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 SAYSD1Q9NPB0 183 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 CYLDQ9NQC7 956 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 AAASQ9NRG9 546 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 DDX20Q9UHI6 824 aaKnown RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 DNPEPQ9ULA0 475 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 UBQLN1Q9UMX0 589 aaKnown RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 SMG5Q9UPR3 1016 aaKnown RBP9.39□□□□□ -0.91
TMEM116-209ENST00000550020 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
TMEM116-209ENST00000550020 EXOC1LA0A1B0GW35 172 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 BTBD19C9JJ37 291 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 CST8O60676 142 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 SNAI1O95863 264 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-209ENST00000550020 TRUB2O95900 331 aaKnown RBP9.38□□□□□ -0.91
TMEM116-209ENST00000550020 VTNP04004 478 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 GJB1P08034 283 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 VIMP08670 466 aaKnown RBP9.38□□□□□ -0.91
TMEM116-209ENST00000550020 FAM163BP0C2L3 166 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 GNAT1P11488 350 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 BRAFP15056 766 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 DRD4P21917 467 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 TGM2P21980 687 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 SDC4P31431 198 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 CHKAP35790 457 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 ACADSBP45954 432 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 RAP1GAPP47736 663 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 NDST1P52848 882 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 SLC8A3P57103 927 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 IFI35P80217 286 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-209ENST00000550020 IL9RQ01113 521 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 OGDHQ02218 1023 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 IFT88Q13099 833 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 KRT81Q14533 505 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 LLGL1Q15334 1064 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 HIF1AQ16665 826 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 LONRF1Q17RB8 773 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 OR6B2Q6IFH4 312 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 ARCQ7LC44 396 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 EXOC3L1Q86VI1 746 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 KIAA0319LQ8IZA0 1049 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 PDIK1LQ8N165 341 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 MICALL1Q8N3F8 863 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 GBP7Q8N8V2 638 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-209ENST00000550020 ATP11CQ8NB49 1132 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 UHMK1Q8TAS1 419 aaKnown RBP9.38□□□□□ -0.91
TMEM116-209ENST00000550020 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
TMEM116-209ENST00000550020 MAML3Q96JK9 1138 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 CPXM1Q96SM3 734 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 FERMT1Q9BQL6 677 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 HERPUD2Q9BSE4 406 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 SYT17Q9BSW7 474 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 DDX23Q9BUQ8 820 aaKnown RBP9.38□□□□□ -0.91
TMEM116-209ENST00000550020 KATNAL1Q9BW62 490 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 TRIM6Q9C030 488 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-209ENST00000550020 SDCBP2Q9H190 292 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 KDM4CQ9H3R0 1056 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 RABEP2Q9H5N1 569 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 VPS37BQ9H9H4 285 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 KCNK9Q9NPC2 374 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 KLHL11Q9NVR0 708 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 USP18Q9UMW8 372 aa9.38□□□□□ -0.91
TMEM116-209ENST00000550020 SBF1O95248 1867 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 TMEM120BA0PK00 339 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 C3orf70A6NLC5 250 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 DCDC2CA8MYV0 355 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 TP73O15350 636 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 KPNA6O60684 536 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 SUN1O94901 812 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 GJB6O95452 261 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 NPTXRO95502 500 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 IFNB1P01574 187 aa9.37□□□□□ -0.91
TMEM116-209ENST00000550020 RPLP2P05387 115 aaKnown RBP9.37□□□□□ -0.91
TMEM116-209ENST00000550020 GSTA1P08263 222 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms