RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.48■□□□□ 0.55
HDAC7-227ENST00000548080 NIF3L1Q9GZT8 377 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 SDCBP2Q9H190 292 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 CRISPLD1Q9H336 500 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 SFXN1Q9H9B4 322 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 TMLHEQ9NVH6 421 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 REXO2Q9Y3B8 237 aaKnown RBP18.48■□□□□ 0.55
HDAC7-227ENST00000548080 NME7Q9Y5B8 376 aa18.48■□□□□ 0.55
HDAC7-227ENST00000548080 CCDC195A0A1B0GUA6 201 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 CCL16O15467 120 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 ATP2C2O75185 946 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 SOAT2O75908 522 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 ABLIM3O94929 683 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 STAU1O95793 577 aaKnown RBP18.47■□□□□ 0.55
HDAC7-227ENST00000548080 SP100P23497 879 aaPredicted RBP18.47■□□□□ 0.55
HDAC7-227ENST00000548080 LMO2P25791 158 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 PSMC1P62191 440 aaKnown RBP18.47■□□□□ 0.55
HDAC7-227ENST00000548080 SMAD4Q13485 552 aaKnown RBP18.47■□□□□ 0.55
HDAC7-227ENST00000548080 AAK1Q2M2I8 961 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 LIN9Q5TKA1 542 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 LIMS2Q7Z4I7 341 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 ATAD1Q8NBU5 361 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 ZNF461Q8TAF7 563 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 ARID3AQ99856 593 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 ZCWPW1Q9H0M4 648 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 VRTNQ9H8Y1 702 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 CYP4F11Q9HBI6 524 aa18.47■□□□□ 0.55
HDAC7-227ENST00000548080 PRRG1O14668 218 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 CYP26A1O43174 497 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 KRT5P13647 590 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 HOXB8P17481 243 aaPredicted RBP18.46■□□□□ 0.55
HDAC7-227ENST00000548080 ACO1P21399 889 aaKnown RBP18.46■□□□□ 0.55
HDAC7-227ENST00000548080 CLCN1P35523 988 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 CYP27A1Q02318 531 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 ORC1Q13415 861 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 SLC18A3Q16572 532 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 PPM1LQ5SGD2 360 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 TMEM86AQ8N2M4 240 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 OR6B3Q8NGW1 331 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 ZNF707Q96C28 371 aaPredicted RBP18.46■□□□□ 0.55
HDAC7-227ENST00000548080 NECAB3Q96P71 396 aaPredicted RBP18.46■□□□□ 0.55
HDAC7-227ENST00000548080 PLEKHA4Q9H4M7 779 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 SLC27A5Q9Y2P5 690 aa18.46■□□□□ 0.55
HDAC7-227ENST00000548080 A0A087X0T9 212 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 MTMR11A4FU01 709 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 ZNF263O14978 683 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 ZMYND10O75800 440 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 FAM228BP0C875 321 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 BMP1P13497 986 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 ATF2P15336 505 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 WARSP23381 471 aaKnown RBP18.46■□□□□ 0.54
HDAC7-227ENST00000548080 ELF1P32519 619 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 YWHAEP62258 255 aaKnown RBP18.46■□□□□ 0.54
HDAC7-227ENST00000548080 GFPT1Q06210 699 aaPredicted RBP18.46■□□□□ 0.54
HDAC7-227ENST00000548080 UBR7Q8N806 425 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 SYT11Q9BT88 431 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 RHOBTB2Q9BYZ6 727 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 ADAM7Q9H2U9 754 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 SNX25Q9H3E2 840 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 DPEP3Q9H4B8 488 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 AFF4Q9UHB7 1163 aaKnown RBP18.46■□□□□ 0.54
HDAC7-227ENST00000548080 ADAMTS1Q9UHI8 967 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 CNTN6Q9UQ52 1028 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 PCDHB4Q9Y5E5 795 aa18.46■□□□□ 0.54
HDAC7-227ENST00000548080 GABRDO14764 452 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 P4HA1P13674 534 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 TNFAIP3P21580 790 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 ASPAP45381 313 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 BPIFB4P59827 614 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 TSPY1Q01534 308 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 DUSP4Q13115 394 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 GPR17Q13304 367 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 CES5AQ6NT32 575 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 KIAA1328Q86T90 577 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 SMG7Q92540 1137 aaKnown RBP18.45■□□□□ 0.54
HDAC7-227ENST00000548080 AGPAT1Q99943 283 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 SYT15Q9BQS2 421 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 POMKQ9H5K3 350 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 LUC7LQ9NQ29 371 aaKnown RBP18.45■□□□□ 0.54
HDAC7-227ENST00000548080 HCFC1R1Q9NWW0 138 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 ABI2Q9NYB9 513 aaPredicted RBP18.45■□□□□ 0.54
HDAC7-227ENST00000548080 HMGXB4Q9UGU5 601 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 GTF3C4Q9UKN8 822 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 PCDHA13Q9Y5I0 950 aa18.45■□□□□ 0.54
HDAC7-227ENST00000548080 VCANP13611 3396 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 A0A0C4DFX4 3053 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 MYBPHLA2RUH7 354 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 DDX3XO00571 662 aaKnown RBP eCLIP18.44■□□□□ 0.54
HDAC7-227ENST00000548080 CD58P19256 250 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 GNL1P36915 607 aaPredicted RBP18.44■□□□□ 0.54
HDAC7-227ENST00000548080 MAGEA1P43355 309 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 LHX1P48742 406 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 VAV2P52735 878 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 NTHL1P78549 312 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 INTS6LQ5JSJ4 861 aaKnown RBP18.44■□□□□ 0.54
HDAC7-227ENST00000548080 TJAP1Q5JTD0 557 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 C10orf76Q5T2E6 689 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 TPGS2Q68CL5 300 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 ZNF662Q6ZS27 426 aa18.44■□□□□ 0.54
HDAC7-227ENST00000548080 DPH6Q7L8W6 267 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms