RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 CENPUQ71F23 418 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 PCGF5Q86SE9 256 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 HEXIM2Q96MH2 286 aaKnown RBP16.3■□□□□ 0.2
BRF1-212ENST00000547562 VTA1Q9NP79 307 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 AGAP1Q9UPQ3 857 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 FARP1Q9Y4F1 1045 aaPredicted RBP16.3■□□□□ 0.2
BRF1-212ENST00000547562 COL1A2P08123 1366 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 RASA4BC9J798 803 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 RASA4O43374 803 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 SNX3O60493 162 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 RNF8O76064 485 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 CD48P09326 243 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 MIPP30301 263 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 HNRNPH1P31943 449 aaKnown RBP16.3■□□□□ 0.2
BRF1-212ENST00000547562 SF3A3Q12874 501 aaKnown RBP eCLIP16.3■□□□□ 0.23e-6■■■■■ 41.3
BRF1-212ENST00000547562 SNAPC2Q13487 334 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 HP1BP3Q5SSJ5 553 aaPredicted RBP16.3■□□□□ 0.2
BRF1-212ENST00000547562 ARHGEF18Q6ZSZ5 1173 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 TDRPQ86YL5 185 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 ZBED8Q8IZ13 594 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 KCTD6Q8NC69 237 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 CMASQ8NFW8 434 aaPredicted RBP16.3■□□□□ 0.2
BRF1-212ENST00000547562 AFG1LQ8WV93 481 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 FGFR1OP2Q9NVK5 253 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 PCSK1NQ9UHG2 260 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 ITGA11Q9UKX5 1188 aa16.3■□□□□ 0.2
BRF1-212ENST00000547562 OAS1P00973 400 aaKnown RBP16.29■□□□□ 0.2
BRF1-212ENST00000547562 GDF10P55107 478 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 INCA1Q0VD86 236 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 NR1H3Q13133 447 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 MAP1SQ66K74 1059 aaPredicted RBP16.29■□□□□ 0.2
BRF1-212ENST00000547562 GDAP1Q8TB36 358 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 ZC3H15Q8WU90 426 aaKnown RBP16.29■□□□□ 0.2
BRF1-212ENST00000547562 EMID1Q96A84 441 aaPredicted RBP16.29■□□□□ 0.2
BRF1-212ENST00000547562 C16orf70Q9BSU1 422 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 NKIRAS1Q9NYS0 192 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 PNMA3Q9UL41 463 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 BARX2Q9UMQ3 279 aaPredicted RBP16.29■□□□□ 0.2
BRF1-212ENST00000547562 C2CD2Q9Y426 696 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 TRUB2O95900 331 aaKnown RBP16.29■□□□□ 0.2
BRF1-212ENST00000547562 ADORA2AP29274 412 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
BRF1-212ENST00000547562 FAM102AQ5T9C2 384 aaPredicted RBP16.29■□□□□ 0.2
BRF1-212ENST00000547562 NUGGCQ68CJ6 796 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 MTHFD1LQ6UB35 978 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 USP50Q70EL3 339 aaPredicted RBP16.29■□□□□ 0.2
BRF1-212ENST00000547562 GPRC5AQ8NFJ5 357 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 NLRP7Q8WX94 980 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 ADPGKQ9BRR6 497 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 C10orf88Q9H8K7 445 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 ASNSD1Q9NWL6 643 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 USP18Q9UMW8 372 aa16.29■□□□□ 0.2
BRF1-212ENST00000547562 SCN1AP35498 2009 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 RBM47A0AV96 593 aaKnown RBP16.28■□□□□ 0.2
BRF1-212ENST00000547562 TSPAN1O60635 241 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 ATP2C2O75185 946 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 STX2P32856 288 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 NDST1P52848 882 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 CCNA1P78396 465 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 RBP5P82980 135 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 PDIA2Q13087 525 aaKnown RBP16.28■□□□□ 0.2
BRF1-212ENST00000547562 TAF5Q15542 800 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 HIF1AQ16665 826 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 PPP1R21Q6ZMI0 780 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 TRABD2AQ86V40 505 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 RFX6Q8HWS3 928 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 PPIL6Q8IXY8 311 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 UBA3Q8TBC4 463 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 GTF3C2Q8WUA4 911 aaPredicted RBP16.28■□□□□ 0.2
BRF1-212ENST00000547562 HSPH1Q92598 858 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 ACAP3Q96P50 834 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 FAM124BQ9H5Z6 455 aaPredicted RBP16.28■□□□□ 0.2
BRF1-212ENST00000547562 VPS37BQ9H9H4 285 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 DPP3Q9NY33 737 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 APOC4-APOC2K7ER74 178 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 RASSF9O75901 435 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 STAU1O95793 577 aaKnown RBP16.28■□□□□ 0.2
BRF1-212ENST00000547562 APOC2P02655 101 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 PCK1P35558 622 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 ZNF143P52747 638 aaPredicted RBP16.28■□□□□ 0.2
BRF1-212ENST00000547562 ADCY1Q08828 1119 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 DPH6Q7L8W6 267 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 RSAD2Q8WXG1 361 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 CPT1BQ92523 772 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 MAGEB18Q96M61 343 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 PHACTR1Q9C0D0 580 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 UBN1Q9NPG3 1134 aa16.28■□□□□ 0.2
BRF1-212ENST00000547562 USP15Q9Y4E8 981 aaPredicted RBP16.28■□□□□ 0.2
BRF1-212ENST00000547562 A0A1B0GUA9 196 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 FAM47DPA6NHR8 397 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 POC1B-GALNT4F8VUJ3 575 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 GOLGA8MH3BSY2 632 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 CYP3A5P20815 502 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 ADCYAP1R1P41586 468 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 LCLAT1Q6UWP7 414 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 CAPN12Q6ZSI9 719 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 TRPM8Q7Z2W7 1104 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 NT5DC4Q86YG4 428 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 TTC39CQ8N584 583 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 SGSM3Q96HU1 749 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms