RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SOBPA7XYQ1 873 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 K7ESF4 209 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 GNL1P36915 607 aaPredicted RBP14.27□□□□□ -0.13
CPSF6-204ENST00000547486 MYL6P60660 151 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 USP46P62068 366 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 CYP27A1Q02318 531 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 RUNX3Q13761 415 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 LRRC32Q14392 662 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 DGKKQ5KSL6 1271 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 HS2ST1Q7LGA3 356 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 CEP57L1Q8IYX8 460 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 KIAA0895Q8NCT3 520 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 ELMO3Q96BJ8 720 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 PCED1BQ96HM7 432 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 XYLT2Q9H1B5 865 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 DPEP3Q9H4B8 488 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 FBRSL1Q9HCM7 1045 aaKnown RBP14.27□□□□□ -0.13
CPSF6-204ENST00000547486 TRPC7Q9HCX4 862 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 GCNT4Q9P109 453 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 UXTQ9UBK9 157 aaPredicted RBP14.27□□□□□ -0.13
CPSF6-204ENST00000547486 FANCMQ8IYD8 2048 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 TCHHQ07283 1943 aa14.27□□□□□ -0.13
CPSF6-204ENST00000547486 HRO43593 1189 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 EXOC3O60645 756 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 TACC1O75410 805 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 PFKFB1P16118 471 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 CMA1P23946 247 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 GRIK1P39086 918 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 CACNA2D1P54289 1103 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 NRLP54845 237 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 ZNF268Q14587 947 aaPredicted RBP14.26□□□□□ -0.13
CPSF6-204ENST00000547486 WDR72Q3MJ13 1102 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 KMT5BQ4FZB7 885 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 MDH1BQ5I0G3 518 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 NAIF1Q69YI7 327 aaPredicted RBP14.26□□□□□ -0.13
CPSF6-204ENST00000547486 FSTL4Q6MZW2 842 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 PKN3Q6P5Z2 889 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 VSTM1Q6UX27 236 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 C4orf50Q6ZRC1 276 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 ARL14EPQ8N8R7 260 aaPredicted RBP14.26□□□□□ -0.13
CPSF6-204ENST00000547486 OR6B3Q8NGW1 331 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 MYCBPAPQ8TBZ2 947 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 SPATA17Q96L03 361 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 SNX25Q9H3E2 840 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 TMEM30AQ9NV96 361 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 DMAC2Q9NW81 257 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 SMG5Q9UPR3 1016 aaKnown RBP14.26□□□□□ -0.13
CPSF6-204ENST00000547486 OTOGLQ3ZCN5 2332 aa14.26□□□□□ -0.13
CPSF6-204ENST00000547486 CHURC1-FNTBB4DL54 471 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 FAM163BP0C2L3 166 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 PTPN1P18031 435 aaKnown RBP14.25□□□□□ -0.13
CPSF6-204ENST00000547486 TGM1P22735 817 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 FNTBP49356 437 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 CLDN10P78369 228 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 ZXDBP98169 803 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 SRSF5Q13243 272 aaKnown RBP14.25□□□□□ -0.13
CPSF6-204ENST00000547486 PPP2R5DQ14738 602 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 MAPRE1Q15691 268 aaKnown RBP14.25□□□□□ -0.13
CPSF6-204ENST00000547486 ZNF77Q15935 545 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 LPAL2Q16609 132 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 TMEM196Q5HYL7 178 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 TTC16Q8NEE8 873 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 PARD3BQ8TEW8 1205 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 KCTD10Q9H3F6 313 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 KIF9Q9HAQ2 790 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 CGNQ9P2M7 1197 aaKnown RBP14.25□□□□□ -0.13
CPSF6-204ENST00000547486 NCDNQ9UBB6 729 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 NXF1Q9UBU9 619 aaKnown RBP14.25□□□□□ -0.13
CPSF6-204ENST00000547486 HPSEQ9Y251 543 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 SPTBN4Q9H254 2564 aa14.25□□□□□ -0.13
CPSF6-204ENST00000547486 TRAV19A0A0A6YYK7 116 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 LRRIQ3A6PVS8 624 aaPredicted RBP14.24□□□□□ -0.13
CPSF6-204ENST00000547486 F8VP50 259 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 CLDN5O00501 218 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 TRDMT1O14717 391 aaKnown RBP14.24□□□□□ -0.13
CPSF6-204ENST00000547486 PAPSS2O95340 614 aaPredicted RBP14.24□□□□□ -0.13
CPSF6-204ENST00000547486 STAU1O95793 577 aaKnown RBP14.24□□□□□ -0.13
CPSF6-204ENST00000547486 C4BPAP04003 597 aaKnown RBP14.24□□□□□ -0.13
CPSF6-204ENST00000547486 USP17L7P0C7H9 530 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 HDCP19113 662 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 GALK1P51570 392 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 CDH8P55286 799 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 TNNC1P63316 161 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 DLG4P78352 724 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 FAM160A1Q05DH4 1040 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 TRPC3Q13507 836 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 MTF1Q14872 753 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 PDGFRLQ15198 375 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 TDRD10Q5VZ19 366 aaKnown RBP14.24□□□□□ -0.13
CPSF6-204ENST00000547486 CC2D1AQ6P1N0 951 aaPredicted RBP14.24□□□□□ -0.13
CPSF6-204ENST00000547486 DENND5BQ6ZUT9 1274 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 SYNPOQ8N3V7 929 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 C8orf48Q96LL4 319 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 B3GNT5Q9BYG0 378 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 ZNF518BQ9C0D4 1074 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 LINC00597Q9H2U6 94 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 POLR3BQ9NW08 1133 aaPredicted RBP14.24□□□□□ -0.13
CPSF6-204ENST00000547486 DUS2Q9NX74 493 aaKnown RBP14.24□□□□□ -0.13
CPSF6-204ENST00000547486 WNT6Q9Y6F9 365 aa14.24□□□□□ -0.13
CPSF6-204ENST00000547486 NUP210Q8TEM1 1887 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms