RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ZNF461Q8TAF7 563 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 ATRIPQ8WXE1 791 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 MMS19Q96T76 1030 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 IER2Q9BTL4 223 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 FAM126AQ9BYI3 521 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-226ENST00000547259 NIF3L1Q9GZT8 377 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 APOBEC3GQ9HC16 384 aaKnown RBP12.88□□□□□ -0.35
HDAC7-226ENST00000547259 FAM207AQ9NSI2 230 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-226ENST00000547259 SPATA6Q9NWH7 488 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-226ENST00000547259 NXF1Q9UBU9 619 aaKnown RBP12.88□□□□□ -0.35
HDAC7-226ENST00000547259 APEX2Q9UBZ4 518 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 MAFFQ9ULX9 164 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 SIK3Q9Y2K2 1263 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 SNX9Q9Y5X1 595 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 CDY1Q9Y6F8 540 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 NOTCH4Q99466 2003 aa12.88□□□□□ -0.35
HDAC7-226ENST00000547259 GPR179Q6PRD1 2367 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 FAM170BA6NMN3 283 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 H7C4K7 107 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 I3L4J1 428 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 MAN2B1O00754 1011 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 SYN3O14994 580 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 HUS1O60921 280 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 MICAL2O94851 1124 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 ADCY5O95622 1261 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 ODC1P11926 461 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 TRIM21P19474 475 aaKnown RBP12.87□□□□□ -0.35
HDAC7-226ENST00000547259 TBXAS1P24557 533 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-226ENST00000547259 IGFBP6P24592 240 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-226ENST00000547259 RPS9P46781 194 aaKnown RBP12.87□□□□□ -0.35
HDAC7-226ENST00000547259 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
HDAC7-226ENST00000547259 APBA1Q02410 837 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 CD300LGQ6UXG3 332 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 ZNF852Q6ZMS4 543 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 KIAA2013Q8IYS2 634 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 ELMOD1Q8N336 334 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 DNASE1L2Q92874 299 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 TATDN2Q93075 761 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 MRFAP1L1Q96HT8 127 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 FOXQ1Q9C009 403 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 SIX2Q9NPC8 291 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 PLCB1Q9NQ66 1216 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 GDAP2Q9NXN4 497 aa12.87□□□□□ -0.35
HDAC7-226ENST00000547259 ARHGEF37A1IGU5 675 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 CYB561D2O14569 222 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 PRRG1O14668 218 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 PBX1P40424 430 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 ASPAP45381 313 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 RAP1GAPP47736 663 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 NRLP54845 237 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 NTHL1P78549 312 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 CUL2Q13617 745 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 RAPGEF1Q13905 1077 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 KLHDC7AQ5VTJ3 777 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 TPGS2Q68CL5 300 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 SLC8B1Q6J4K2 584 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 GJB7Q6PEY0 223 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 RRAGAQ7L523 313 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 TMC6Q7Z403 805 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 VSTM4Q8IW00 320 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 NPAS3Q8IXF0 933 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 LEMD2Q8NC56 503 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 APPL2Q8NEU8 664 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 ITFG1Q8TB96 612 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 CLDN23Q96B33 292 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 ELSPBP1Q96BH3 223 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 SUSD3Q96L08 255 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 SENP8Q96LD8 212 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 FAM81BQ96LP2 452 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 RPP25Q9BUL9 199 aaKnown RBP12.86□□□□□ -0.35
HDAC7-226ENST00000547259 GANQ9H2C0 597 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 SMYD3Q9H7B4 428 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 LTB4R2Q9NPC1 389 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 UBE2TQ9NPD8 197 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-226ENST00000547259 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 DNMT3BQ9UBC3 853 aaKnown RBP12.86□□□□□ -0.35
HDAC7-226ENST00000547259 FHOD1Q9Y613 1164 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 NCOR2Q9Y618 2525 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 ITIH6Q6UXX5 1313 aa12.86□□□□□ -0.35
HDAC7-226ENST00000547259 PATJQ8NI35 1801 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 SPTBN2O15020 2390 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 M0QZQ0 153 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 EPHB6O15197 1021 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 RHOP08100 348 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 GLULP15104 373 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 ATF2P15336 505 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 UCHL3P15374 230 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 CD58P19256 250 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 MFAP3P55082 362 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 POLR2FP61218 127 aaKnown RBP12.85□□□□□ -0.35
HDAC7-226ENST00000547259 YWHAEP62258 255 aaKnown RBP12.85□□□□□ -0.35
HDAC7-226ENST00000547259 GCNT1Q02742 428 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 ADCY1Q08828 1119 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 VARS2Q5ST30 1063 aaKnown RBP12.85□□□□□ -0.35
HDAC7-226ENST00000547259 CYP4A22Q5TCH4 519 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 IQCEQ6IPM2 695 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 C1orf228Q6PIY5 440 aa12.85□□□□□ -0.35
HDAC7-226ENST00000547259 CACNA2D4Q7Z3S7 1137 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms