RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 TFAP2BQ92481 460 aa24.57■■□□□ 1.52
SMARCD1-203ENST00000547247 MYO6Q9UM54 1294 aa24.57■■□□□ 1.52
SMARCD1-203ENST00000547247 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.57■■□□□ 1.521e-8■□□□□ 10.2
SMARCD1-203ENST00000547247 BRWD1Q9NSI6 2320 aa24.57■■□□□ 1.52
SMARCD1-203ENST00000547247 PTPRDP23468 1912 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 CCL16O15467 120 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 XYLBO75191 536 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 AP1G2O75843 785 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 PAPLNO95428 1278 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 FAM200BP0CF97 657 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 KCNA5P22460 613 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 CNGA2Q16280 664 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 DDR2Q16832 855 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 SPECC1LQ69YQ0 1117 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 VSTM4Q8IW00 320 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 ELMOD1Q8N336 334 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 APOL5Q9BWW9 433 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 ACP6Q9NPH0 428 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 THEGQ9P2T0 379 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 HESX1Q9UBX0 185 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 TSPAN16Q9UKR8 245 aa24.56■■□□□ 1.52
SMARCD1-203ENST00000547247 H3BQ06 376 aaPredicted RBP24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 O00370 1275 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 TRIM66O15016 1216 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 THAP12O43422 761 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 CALCAP01258 141 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 POU2F2P09086 479 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 ATF6P18850 670 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 ITIH3Q06033 890 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 CYP26C1Q6V0L0 522 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 ZNF606Q8WXB4 792 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 BAP1Q92560 729 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 ZNF707Q96C28 371 aaPredicted RBP24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 C8orf48Q96LL4 319 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 DMAP1Q9NPF5 467 aaPredicted RBP24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 CD207Q9UJ71 328 aa24.55■■□□□ 1.52
SMARCD1-203ENST00000547247 A0A1W2PQJ5 194 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 F8VP50 259 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 MED7O43513 233 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 GFPT2O94808 682 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 ANXA13P27216 316 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 GPR15P49685 360 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 ZNF75DP51815 510 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 CACNA2D1P54289 1103 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 VEPH1Q14D04 833 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 GOLGA7BQ2TAP0 167 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 CES5AQ6NT32 575 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 LCLAT1Q6UWP7 414 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 SLC47A2Q86VL8 602 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 FMNL3Q8IVF7 1028 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 ANKRD52Q8NB46 1076 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 SMG7Q92540 1137 aaKnown RBP24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 ZSWIM1Q9BR11 485 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 DUSP16Q9BY84 665 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 S1PR5Q9H228 398 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 ADAM7Q9H2U9 754 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 PIDD1Q9HB75 910 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 CSNK1G1Q9HCP0 422 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 TMEM30AQ9NV96 361 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 ASB3Q9Y575 518 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 NPR3P17342 541 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 MAP3K7CLP57077 242 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 SLC8A3P57103 927 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 CLEC20AQ6ZU45 233 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 GPR149Q86SP6 731 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 SMRP1Q8NCR6 262 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 ZNF397Q8NF99 534 aaPredicted RBP24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 GIPC2Q8TF65 315 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 MRFAP1L1Q96HT8 127 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 SPATA17Q96L03 361 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 CEP295NLQ96MC4 621 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 ZNF512Q96ME7 567 aaPredicted RBP24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 KCNK16Q96T55 309 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 SMOQ99835 787 aa24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.54■■□□□ 1.52
SMARCD1-203ENST00000547247 CYP11B1P15538 503 aa24.53■■□□□ 1.52
SMARCD1-203ENST00000547247 TFF2Q03403 129 aa24.53■■□□□ 1.52
SMARCD1-203ENST00000547247 CLUL1Q15846 466 aa24.53■■□□□ 1.52
SMARCD1-203ENST00000547247 SDHAF4Q5VUM1 108 aa24.53■■□□□ 1.52
SMARCD1-203ENST00000547247 ITIH5Q86UX2 942 aa24.53■■□□□ 1.52
SMARCD1-203ENST00000547247 CPLX3Q8WVH0 158 aa24.53■■□□□ 1.52
SMARCD1-203ENST00000547247 CAPN11Q9UMQ6 739 aa24.53■■□□□ 1.52
SMARCD1-203ENST00000547247 LRRC53A6NM62 1247 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 BEST1O76090 585 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 MICAL2O94851 1124 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 GYPCP04921 128 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 CCDC172P0C7W6 258 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 PDE6CP51160 858 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 BCAT1P54687 386 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 TRIM14Q14142 442 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 TAF12Q16514 161 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 TTC30AQ86WT1 665 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 GPR152Q8TDT2 470 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 PSMG2Q969U7 264 aa24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 LUC7L2Q9Y383 392 aaKnown RBP24.52■■□□□ 1.52
SMARCD1-203ENST00000547247 CSH1P0DML2 217 aa24.51■■□□□ 1.51
SMARCD1-203ENST00000547247 CSH2P0DML3 217 aa24.51■■□□□ 1.51
SMARCD1-203ENST00000547247 FERP16591 822 aa24.51■■□□□ 1.51
SMARCD1-203ENST00000547247 PTPN2P17706 415 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms