RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 SPATA17Q96L03 361 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 CRTAC1Q9NQ79 661 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 RBM12Q9NTZ6 932 aaKnown RBP15.38■□□□□ 0.05
COL2A1-209ENST00000546974 SERTAD1Q9UHV2 236 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 SMG5Q9UPR3 1016 aaKnown RBP15.38■□□□□ 0.05
COL2A1-209ENST00000546974 ATG2BQ96BY7 2078 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 CEP250Q9BV73 2442 aa15.38■□□□□ 0.05
COL2A1-209ENST00000546974 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-209ENST00000546974 KLRC4O43908 158 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 STAU1O95793 577 aaKnown RBP15.37■□□□□ 0.05
COL2A1-209ENST00000546974 PDGFRBP09619 1106 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 BDNFP23560 247 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 FAM160A1Q05DH4 1040 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 PSMD2Q13200 908 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 GRAMD1CQ8IYS0 662 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 FSIP1Q8NA03 581 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 MYCBPAPQ8TBZ2 947 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 ZNF516Q92618 1163 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 SECISBP2LQ93073 1101 aaKnown RBP15.37■□□□□ 0.05
COL2A1-209ENST00000546974 PAGE5Q96GU1 130 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 MRPL45Q9BRJ2 306 aaKnown RBP15.37■□□□□ 0.05
COL2A1-209ENST00000546974 GZF1Q9H116 711 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-209ENST00000546974 SNX25Q9H3E2 840 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 HPS4Q9NQG7 708 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 NCDNQ9UBB6 729 aa15.37■□□□□ 0.05
COL2A1-209ENST00000546974 TRAV19A0A0A6YYK7 116 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 ACTN4O43707 911 aaKnown RBP15.36■□□□□ 0.05
COL2A1-209ENST00000546974 EXOC3O60645 756 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 USP17L7P0C7H9 530 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 CMA1P23946 247 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 ATICP31939 592 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 GRIK1P39086 918 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 TNNC1P63316 161 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 AMPD2Q01433 879 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 CYP27A1Q02318 531 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 TRPC3Q13507 836 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 PDGFRLQ15198 375 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 WDR72Q3MJ13 1102 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 TRIM68Q6AZZ1 485 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 CC2D1AQ6P1N0 951 aaPredicted RBP15.36■□□□□ 0.05
COL2A1-209ENST00000546974 ERMP1Q7Z2K6 904 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 GPR161Q8N6U8 529 aaKnown RBP15.36■□□□□ 0.05
COL2A1-209ENST00000546974 RIN3Q8TB24 985 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 TMEM174Q8WUU8 243 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 PCED1BQ96HM7 432 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 EBF3Q9H4W6 596 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 TRPC7Q9HCX4 862 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 USP25Q9UHP3 1055 aa15.36■□□□□ 0.05
COL2A1-209ENST00000546974 HELZP42694 1942 aaKnown RBP15.35■□□□□ 0.05
COL2A1-209ENST00000546974 OTOL1A6NHN0 477 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-209ENST00000546974 K7ESF4 209 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 TRDMT1O14717 391 aaKnown RBP15.35■□□□□ 0.05
COL2A1-209ENST00000546974 TRIM66O15016 1216 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 MYL1P05976 194 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 PFKLP17858 780 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 ANXA13P27216 316 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 AP3M2P53677 418 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 MYL6P60660 151 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 STK4Q13043 487 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 MTF1Q14872 753 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 ZNF77Q15935 545 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 KMT5BQ4FZB7 885 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 TMEM196Q5HYL7 178 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 Q6ZS52 159 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 DENND5BQ6ZUT9 1274 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 SLC9A9Q8IVB4 645 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 KIAA0895Q8NCT3 520 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 OR6B3Q8NGW1 331 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 PARD3BQ8TEW8 1205 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 SYAP1Q96A49 352 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-209ENST00000546974 SLC22A12Q96S37 553 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 CYP2S1Q96SQ9 504 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 TTLL2Q9BWV7 592 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 XYLT2Q9H1B5 865 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 VRTNQ9H8Y1 702 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 EXOC1Q9NV70 894 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 DMAC2Q9NW81 257 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 EHD2Q9NZN4 543 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 GCNT4Q9P109 453 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 NME7Q9Y5B8 376 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 CACNA1AO00555 2505 aa15.35■□□□□ 0.05
COL2A1-209ENST00000546974 A0A1B0GVL5 298 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 PHACTR2O75167 634 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 CKMP06732 381 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 ARSAP15289 507 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 TCF3P15923 654 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 PFKFB1P16118 471 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 PTPN1P18031 435 aaKnown RBP15.34■□□□□ 0.05
COL2A1-209ENST00000546974 HOXA6P31267 233 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 CNR2P34972 360 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 PPP3CCP48454 512 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 PDE6CP51160 858 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 CLDN10P78369 228 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 GRSF1Q12849 480 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL2A1-209ENST00000546974 USP4Q13107 963 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 MDH1BQ5I0G3 518 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 LONP2Q86WA8 852 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 PLEKHO2Q8TD55 490 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 OSCP1Q8WVF1 389 aa15.34■□□□□ 0.05
COL2A1-209ENST00000546974 RMDN1Q96DB5 314 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms