RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 MIEF2Q96C03 454 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 ASCC2Q9H1I8 757 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 RNPEPL1Q9HAU8 725 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 E5RI56 91 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 KCNA2P16389 499 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 IRGCQ6NXR0 463 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 TFB1MQ8WVM0 346 aaKnown RBP12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 CGRRF1Q99675 332 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 SH3GL2Q99962 352 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 SARS2Q9NP81 518 aaKnown RBP12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 AVENQ9NQS1 362 aaPredicted RBP12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 CHST7Q9NS84 486 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 PNMA3Q9UL41 463 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 RIC1Q4ADV7 1423 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 NCANO14594 1321 aa12.7□□□□□ -0.38
NPC1L1-204ENST00000546276 TRPC5OSA6NMA1 111 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 F8W8V4 182 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 KDM1AO60341 852 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 XPAP23025 273 aaPredicted RBP12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 ACADSBP45954 432 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 PDK2Q15119 407 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 RBBP7Q16576 425 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 DUPD1Q68J44 220 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 NOP9Q86U38 636 aaKnown RBP12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 ASAP3Q8TDY4 903 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 DNAJC19Q96DA6 116 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 ASPSCR1Q9BZE9 553 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 CYP39A1Q9NYL5 469 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 KIF17Q9P2E2 1029 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 FAM86B1E9PN63 330 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 SHOX2O60902 331 aaPredicted RBP12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 FAM86B2P0C5J1 330 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 CNTFP26441 200 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 PTGER2P43116 358 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 STX5Q13190 355 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 ANGPTL8Q6UXH0 198 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 LRRC74BQ6ZQY2 392 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 NUP93Q8N1F7 819 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 FBXO28Q9NVF7 368 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 CTNNAL1Q9UBT7 734 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 ATRNO75882 1429 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 FRMPD4Q14CM0 1322 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 WNT7AO00755 349 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 SLITRK3O94933 977 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 UNC5CO95185 931 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 GRK2P25098 689 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 DDR1Q08345 913 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 KDELC2Q7Z4H8 507 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 IFNEQ86WN2 208 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 ZCCHC9Q8N567 271 aaKnown RBP12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 OXNAD1Q96HP4 312 aaPredicted RBP12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 HSD3B7Q9H2F3 369 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 BLOC1S6Q9UL45 172 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 STARD13Q9Y3M8 1113 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 RPS6KL1Q9Y6S9 549 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 OPLAHO14841 1288 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 DEAF1O75398 565 aaPredicted RBP12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 GCNT1Q02742 428 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 AADACL2Q6P093 401 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 FOXR2Q6PJQ5 311 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 BNC2Q6ZN30 1099 aaPredicted RBP12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 C4orf19Q8IY42 314 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 APPL2Q8NEU8 664 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 USP33Q8TEY7 942 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 PPP2R3CQ969Q6 453 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 HES6Q96HZ4 224 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 APOPT1Q96IL0 206 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 HPDLQ96IR7 371 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 RMDN2Q96LZ7 410 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 EFCAB1Q9HAE3 211 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 HACD3Q9P035 362 aa12.69□□□□□ -0.38
NPC1L1-204ENST00000546276 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 SDR42E2A6NKP2 422 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 SMIM22K7EJ46 135 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 MTSS1O43312 755 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 STRNO43815 780 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 H2AFYO75367 372 aaKnown RBP12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 KCNJ2P63252 427 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 PLOD1Q02809 727 aaPredicted RBP12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 SEZ6Q53EL9 994 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 RNF43Q68DV7 783 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 ZNF555Q8NEP9 628 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 LNX1Q8TBB1 728 aaPredicted RBP12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 ACER1Q8TDN7 264 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 MMP19Q99542 508 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 MTMR12Q9C0I1 747 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 SMARCAD1Q9H4L7 1026 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 LZTS1Q9Y250 596 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 OGTO15294 1046 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 TXNP10599 105 aaKnown RBP12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 SERPINB5P36952 375 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 LAMB3Q13751 1172 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 CCDC92Q53HC0 331 aaPredicted RBP12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 WLSQ5T9L3 541 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 CYP2W1Q8TAV3 490 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 VCPIP1Q96JH7 1222 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 NAT9Q9BTE0 207 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 TAS2R14Q9NYV8 317 aa12.68□□□□□ -0.38
NPC1L1-204ENST00000546276 PPME1Q9Y570 386 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms