RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ABCD1P33897 745 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 RPA3P35244 121 aaPredicted RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 CCNHP51946 323 aaPredicted RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 GTF2BQ00403 316 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 LAMTOR4Q0VGL1 99 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 MAMLD1Q13495 774 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 BMT2Q1RMZ1 405 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 RWDD4Q6NW29 188 aaKnown RBP10.25□□□□□ -0.77
TRAF1-203ENST00000546084 RAPH1Q70E73 1250 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 RSPH3Q86UC2 560 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 RNF135Q8IUD6 432 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 MAP4K3Q8IVH8 894 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ABRAQ8N0Z2 381 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 EFCAB3Q8N7B9 438 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 CKAP2Q8WWK9 683 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 EXT2Q93063 718 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 SCYL1Q96KG9 808 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 B3GNT5Q9BYG0 378 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ANKEF1Q9NU02 776 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 CYP39A1Q9NYL5 469 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 ZFP69BQ9UJL9 534 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 UBIAD1Q9Y5Z9 338 aa10.25□□□□□ -0.77
TRAF1-203ENST00000546084 FAM47DPA6NHR8 397 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 PIK3CDO00329 1044 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 COPEO14579 308 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 DHX15O43143 795 aaKnown RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 LUC7L3O95232 432 aaKnown RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 MOCS2O96007 188 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 ZBTB48P10074 688 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 ESRRAP11474 423 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 GZMAP12544 262 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 BNIP1Q12981 228 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 SDCCAG8Q86SQ7 713 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 KCND2Q9NZV8 630 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 PAPPAQ13219 1627 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 EME2A4GXA9 379 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 H0YCG3 227 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 LDHAP00338 332 aaKnown RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 NFICP08651 508 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 RIPK1Q13546 671 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 MPP2Q14168 576 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 GPR162Q16538 588 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 TSNAXIP1Q2TAA8 658 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 PRAMEF19Q5SWL8 479 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 VSTM1Q6UX27 236 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 MTDHQ86UE4 582 aaKnown RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 USP6NLQ92738 828 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 NAF1Q96HR8 494 aaKnown RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 FAM210AQ96ND0 272 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 MMP19Q99542 508 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 NIF3L1Q9GZT8 377 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 MYLK2Q9H1R3 596 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 R3HDMLQ9H3Y0 253 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 EBF2Q9HAK2 575 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 NUDT5Q9UKK9 219 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 PHTF1Q9UMS5 762 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 ZNF536O15090 1300 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 NEMP1O14524 444 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 GYG2O15488 501 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 PAX3P23760 479 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 SDC4P31431 198 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 PEX5P50542 639 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 RASSF2P50749 326 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 CAPSQ13938 189 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 TWF2Q6IBS0 349 aaKnown RBP10.24□□□□□ -0.77
TRAF1-203ENST00000546084 SLC39A4Q6P5W5 647 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 LRRC6Q86X45 466 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 DEPDC1BQ8WUY9 529 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 AFG1LQ8WV93 481 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 SLC10A4Q96EP9 437 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 HPDLQ96IR7 371 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 ZNF570Q96NI8 536 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 GPR88Q9GZN0 384 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 ANKRD36CQ5JPF3 1778 aa10.24□□□□□ -0.77
TRAF1-203ENST00000546084 CALB1P05937 261 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 SRGAP2BP0DMP2 458 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 MAPTP10636 758 aaKnown RBP10.23□□□□□ -0.77
TRAF1-203ENST00000546084 FAM161BQ96MY7 647 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 ACAP3Q96P50 834 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 KIAA1683Q9H0B3 1180 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 NOD1Q9Y239 953 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 HCRTO43612 131 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 LGR5O75473 907 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 RANBP1P43487 201 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 ROR1Q01973 937 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 SPOCD1Q6ZMY3 1216 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 ECHDC2Q86YB7 292 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 RYBPQ8N488 228 aaPredicted RBP10.23□□□□□ -0.77
TRAF1-203ENST00000546084 TFAP2BQ92481 460 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 SGF29Q96ES7 293 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 MAGEB18Q96M61 343 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 MECRQ9BV79 373 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 WHRNQ9P202 907 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 NOCTQ9UK39 431 aaKnown RBP10.23□□□□□ -0.77
TRAF1-203ENST00000546084 ZNF541Q9H0D2 1346 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 TRIM49D1C9J1S8 452 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 P4HA1P13674 534 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 RFX1P22670 979 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 TBXAS1P24557 533 aaPredicted RBP10.23□□□□□ -0.77
TRAF1-203ENST00000546084 EPHB2P29323 1055 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms