RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.28■□□□□ 0.36
LIMS2-217ENST00000545738 MUC3AQ02505 3323 aa17.28■□□□□ 0.36
LIMS2-217ENST00000545738 A0A1W2PQJ5 194 aa17.27■□□□□ 0.36
LIMS2-217ENST00000545738 F8VP50 259 aa17.27■□□□□ 0.36
LIMS2-217ENST00000545738 VDRP11473 427 aa17.27■□□□□ 0.36
LIMS2-217ENST00000545738 GOLGA7BQ2TAP0 167 aa17.27■□□□□ 0.36
LIMS2-217ENST00000545738 SGO2Q562F6 1265 aa17.27■□□□□ 0.36
LIMS2-217ENST00000545738 PPP2R3CQ969Q6 453 aa17.27■□□□□ 0.36
LIMS2-217ENST00000545738 ABCB6Q9NP58 842 aa17.27■□□□□ 0.36
LIMS2-217ENST00000545738 PRDM6Q9NQX0 595 aa17.27■□□□□ 0.36
LIMS2-217ENST00000545738 ZNF638Q14966 1978 aaKnown RBP17.27■□□□□ 0.35
LIMS2-217ENST00000545738 PRRG1O14668 218 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 ZMYND10O75800 440 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 GABBR2O75899 941 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 MICAL2O94851 1124 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 CHRNB2P17787 502 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 STAT1P42224 750 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 TWF1Q12792 350 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 MTMR3Q13615 1198 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 MAPRE1Q15691 268 aaKnown RBP17.27■□□□□ 0.35
LIMS2-217ENST00000545738 TAF3Q5VWG9 929 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 C4orf50Q6ZRC1 276 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 GPRIN1Q7Z2K8 1008 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 UBA3Q8TBC4 463 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 C2orf15Q8WU43 125 aaKnown RBP17.27■□□□□ 0.35
LIMS2-217ENST00000545738 PABPC5Q96DU9 382 aaKnown RBP17.27■□□□□ 0.35
LIMS2-217ENST00000545738 MSLNLQ96KJ4 702 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 MED10Q9BTT4 135 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 NUP58Q9BVL2 599 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 PLEKHA4Q9H4M7 779 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 CSNK1G1Q9HCP0 422 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 CYTH4Q9UIA0 394 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 DAAM1Q9Y4D1 1078 aa17.27■□□□□ 0.35
LIMS2-217ENST00000545738 HHLA1C9JL84 531 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 CCL16O15467 120 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 THAP12O43422 761 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 AP1G2O75843 785 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 C1RP00736 705 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 ADKP55263 362 aaKnown RBP17.26■□□□□ 0.35
LIMS2-217ENST00000545738 SMARCB1Q12824 385 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 ANKRD54Q6NXT1 300 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 DENND1BQ6P3S1 775 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 LCLAT1Q6UWP7 414 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 TMC5Q6UXY8 1006 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 GIPC2Q8TF65 315 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 SMARCD1Q96GM5 515 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 SYT11Q9BT88 431 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 HCFC1R1Q9NWW0 138 aa17.26■□□□□ 0.35
LIMS2-217ENST00000545738 H3BQ06 376 aaPredicted RBP17.25■□□□□ 0.35
LIMS2-217ENST00000545738 PAPLNO95428 1278 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 MMEP08473 750 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 MAGEA11P43364 429 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 MAP3K7CLP57077 242 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 USP46P62068 366 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 ZBED6P86452 979 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 CLUL1Q15846 466 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 CNGA2Q16280 664 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 HGSNATQ68CP4 663 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 WDR59Q6PJI9 974 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 EP400NLQ6ZTU2 488 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 PASD1Q8IV76 773 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 SCN4BQ8IWT1 228 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 WDTC1Q8N5D0 677 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 CASP10Q92851 521 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 DUSP16Q9BY84 665 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 EDEM3Q9BZQ6 932 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 AIPL1Q9NZN9 384 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 HSFX1Q9UBD0 423 aa17.25■□□□□ 0.35
LIMS2-217ENST00000545738 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.25■□□□□ 0.35
LIMS2-217ENST00000545738 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.24■□□□□ 0.35
LIMS2-217ENST00000545738 CCDC195A0A1B0GUA6 201 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 M0QYV0 167 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 TNFRSF10BO14763 440 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 MFAP3LO75121 409 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 PLEKP08567 350 aaPredicted RBP17.24■□□□□ 0.35
LIMS2-217ENST00000545738 SKILP12757 684 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 NPR3P17342 541 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 ELF1P32519 619 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 KRT9P35527 623 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 GRIK1P39086 918 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 FMO1Q01740 532 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 PTK2Q05397 1052 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 PDE4CQ08493 712 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 GSE1Q14687 1217 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 LIN9Q5TKA1 542 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 TC2NQ8N9U0 490 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 ANKRD52Q8NB46 1076 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 S1PR5Q9H228 398 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 MYO6Q9UM54 1294 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 FAM200BP0CF97 657 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 HMGA1P17096 107 aaKnown RBP17.24■□□□□ 0.35
LIMS2-217ENST00000545738 GPD2P43304 727 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 ARID5BQ14865 1188 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 PPM1LQ5SGD2 360 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 RARS2Q5T160 578 aaKnown RBP17.24■□□□□ 0.35
LIMS2-217ENST00000545738 VSTM1Q6UX27 236 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 MAFAQ8NHW3 353 aaPredicted RBP17.24■□□□□ 0.35
LIMS2-217ENST00000545738 SCAMP5Q8TAC9 235 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 HDAC7Q8WUI4 952 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 SECISBP2LQ93073 1101 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms