RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SERPINF2P08697 491 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 USP17L7P0C7H9 530 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 FTH1P19P0C7X4 201 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 GUCY2CP25092 1073 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 RDXP35241 583 aaKnown RBP10.13□□□□□ -0.79
CHD4-212ENST00000545083 SLC6A11P48066 632 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 ATXN3P54252 364 aaPredicted RBP10.13□□□□□ -0.79
CHD4-212ENST00000545083 ZXDBP98169 803 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 ST3GAL1Q11201 340 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 SMARCB1Q12824 385 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 NR1H3Q13133 447 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 ORC2Q13416 577 aaPredicted RBP10.13□□□□□ -0.79
CHD4-212ENST00000545083 TRIM29Q14134 588 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 TTC38Q5R3I4 469 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 CCNI2Q6ZMN8 369 aaPredicted RBP10.13□□□□□ -0.79
CHD4-212ENST00000545083 MINDY1Q8N5J2 469 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 DEFB119Q8N690 84 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 ARL14EPQ8N8R7 260 aaPredicted RBP10.13□□□□□ -0.79
CHD4-212ENST00000545083 IGSF22Q8N9C0 903 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 WHAMMQ8TF30 809 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 HMGB4Q8WW32 186 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 ADAMTS14Q8WXS8 1223 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 FAM212AQ96EL1 285 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 LRIG1Q96JA1 1093 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 SPACA7Q96KW9 195 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 CCDC86Q9H6F5 360 aaKnown RBP10.13□□□□□ -0.79
CHD4-212ENST00000545083 TMEM206Q9H813 350 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 RPF1Q9H9Y2 349 aaKnown RBP10.13□□□□□ -0.79
CHD4-212ENST00000545083 DSEQ9UL01 958 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 PCDHB5Q9Y5E4 795 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 PLXNB3Q9ULL4 1909 aa10.13□□□□□ -0.79
CHD4-212ENST00000545083 CFAP46Q8IYW2 2715 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 TRAV19A0A0A6YYK7 116 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 NPHP3-ACAD11A0A0J9YXS1 232 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 OGTO15294 1046 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 GJB3O75712 270 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 CYP17A1P05093 508 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 PAX3P23760 479 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 CYP2F1P24903 491 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 TIE1P35590 1138 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 KIR2DL1P43626 348 aaPredicted RBP10.12□□□□□ -0.79
CHD4-212ENST00000545083 SMTNP53814 917 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 MRPS21P82921 87 aaKnown RBP10.12□□□□□ -0.79
CHD4-212ENST00000545083 GFPT1Q06210 699 aaPredicted RBP10.12□□□□□ -0.79
CHD4-212ENST00000545083 PDIA5Q14554 519 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 TMEM132DQ14C87 1099 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 TRIP6Q15654 476 aaKnown RBP10.12□□□□□ -0.79
CHD4-212ENST00000545083 IL17AQ16552 155 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 DUOXA1Q1HG43 343 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 SLC39A4Q6P5W5 647 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 C12orf40Q86WS4 652 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 METTL23Q86XA0 190 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 DCP1BQ8IZD4 617 aaKnown RBP10.12□□□□□ -0.79
CHD4-212ENST00000545083 THEM5Q8N1Q8 247 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 CCDC26Q8TAB7 109 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 BICD1Q96G01 975 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 TRMT2BQ96GJ1 504 aaKnown RBP10.12□□□□□ -0.79
CHD4-212ENST00000545083 CRELD1Q96HD1 420 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 MYRFLQ96LU7 910 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 MMTAG2Q9BU76 263 aaKnown RBP10.12□□□□□ -0.79
CHD4-212ENST00000545083 DNAAF2Q9NVR5 837 aaKnown RBP10.12□□□□□ -0.79
CHD4-212ENST00000545083 CACNA2D2Q9NY47 1150 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 BCCIPQ9P287 314 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHD4-212ENST00000545083 CPSF3Q9UKF6 684 aaKnown RBP10.12□□□□□ -0.79
CHD4-212ENST00000545083 NAV2Q8IVL1 2488 aa10.12□□□□□ -0.79
CHD4-212ENST00000545083 TCRBV21S2A2A0A5A6 115 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 CYSRT1A8MQ03 144 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 ARHGAP33O14559 1287 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 SCAMP3O14828 347 aaKnown RBP10.11□□□□□ -0.79
CHD4-212ENST00000545083 NFATC1O95644 943 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 TCF3P15923 654 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 HOXD12P35452 270 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 DPP6P42658 865 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 TAF6P49848 677 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 LIG4P49917 911 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 NCKAP1LP55160 1127 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 SPDYCQ5MJ68 293 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 SLCO6A1Q86UG4 719 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 SLC41A1Q8IVJ1 513 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 CD302Q8IX05 232 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 TSPAN18Q96SJ8 248 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 PKMYT1Q99640 499 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 CCSER1Q9C0I3 900 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 POLMQ9NP87 494 aaPredicted RBP10.11□□□□□ -0.79
CHD4-212ENST00000545083 UXTQ9UBK9 157 aaPredicted RBP10.11□□□□□ -0.79
CHD4-212ENST00000545083 ARHGAP26Q9UNA1 814 aa10.11□□□□□ -0.79
CHD4-212ENST00000545083 ZNF462Q96JM2 2506 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 PLXND1Q9Y4D7 1925 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 A0A0B4J269 797 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 TISP43B9A030 160 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 LEFTY2O00292 366 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 HNRNPDLO14979 420 aaKnown RBP10.1□□□□□ -0.79
CHD4-212ENST00000545083 HCRTO43612 131 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 KAT7O95251 611 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 PIGRP01833 764 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 PRB1P04280 392 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 HDCP19113 662 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 ACAT1P24752 427 aaKnown RBP10.1□□□□□ -0.79
CHD4-212ENST00000545083 RPL10AP62906 217 aaKnown RBP10.1□□□□□ -0.79
CHD4-212ENST00000545083 TSPY1Q01534 308 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms