RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CRY1Q16526 586 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 DDR2Q16832 855 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 ZC2HC1CQ53FD0 456 aaPredicted RBP13.8□□□□□ -0.2
USP28-212ENST00000544750 ANO7Q6IWH7 933 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 TMEM92Q6UXU6 159 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 PIP4P1Q86T03 277 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 CCDC26Q8TAB7 109 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 ZCCHC14Q8WYQ9 949 aaKnown RBP13.8□□□□□ -0.2
USP28-212ENST00000544750 TMX3Q96JJ7 454 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 ACBD6Q9BR61 282 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 BLOC1S4Q9NUP1 217 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 TMEM74BQ9NUR3 256 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 MSRB2Q9Y3D2 182 aa13.8□□□□□ -0.2
USP28-212ENST00000544750 TRAV19A0A0A6YYK7 116 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 FAM221BA6H8Z2 402 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 C2orf78A6NCI8 922 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 UPK3BL1B0FP48 263 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 UPK3BL2E5RIL1 263 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 HYAL3O43820 417 aaPredicted RBP13.79□□□□□ -0.2
USP28-212ENST00000544750 P2RY2P41231 377 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 DHPSP49366 369 aaPredicted RBP13.79□□□□□ -0.2
USP28-212ENST00000544750 WNT7BP56706 349 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 RPL10AP62906 217 aaKnown RBP13.79□□□□□ -0.2
USP28-212ENST00000544750 TSPY1Q01534 308 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 NR1H3Q13133 447 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 CCDC142Q17RM4 750 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 UAP1L1Q3KQV9 507 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 SV2CQ496J9 727 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 C2orf27AQ580R0 203 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 INTS6LQ5JSJ4 861 aaKnown RBP13.79□□□□□ -0.2
USP28-212ENST00000544750 PEAR1Q5VY43 1037 aaPredicted RBP13.79□□□□□ -0.2
USP28-212ENST00000544750 SCARA3Q6AZY7 606 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 ADALQ6DHV7 355 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 GPBP1Q86WP2 473 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 NT5DC4Q86YG4 428 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 MYCT1Q8N699 235 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 ARL14EPQ8N8R7 260 aaPredicted RBP13.79□□□□□ -0.2
USP28-212ENST00000544750 CXorf38Q8TB03 319 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 SH3RF2Q8TEC5 729 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 PIGKQ92643 395 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 FNBP1Q96RU3 617 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 ST6GALNAC4Q9H4F1 302 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 PARVGQ9HBI0 331 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 TRPC7Q9HCX4 862 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 KLK13Q9UKR3 277 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 L1RE1Q9UN81 338 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
USP28-212ENST00000544750 PTPRBP23467 1997 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 SMG1Q96Q15 3661 aaKnown RBP13.78□□□□□ -0.2
USP28-212ENST00000544750 VWA3AA6NCI4 1184 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 TAF4O00268 1085 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 TNFRSF10BO14763 440 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 SLC26A4O43511 780 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 FAM13AO94988 1023 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 CKMP06732 381 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 ADSSP30520 456 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 MRPS21P82921 87 aaKnown RBP13.78□□□□□ -0.2
USP28-212ENST00000544750 MESP2Q0VG99 397 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 LMAN2Q12907 356 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 SEMA3BQ13214 749 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 TRIM61Q5EBN2 209 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 KIAA1211LQ6NV74 962 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 SLC23A3Q6PIS1 610 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 OSTM1Q86WC4 334 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 FRMD1Q8N878 549 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 FAM184AQ8NB25 1140 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 ZNF560Q96MR9 790 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 IKZF4Q9H2S9 585 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 MBD1Q9UIS9 605 aaPredicted RBP13.78□□□□□ -0.2
USP28-212ENST00000544750 GTF3C4Q9UKN8 822 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 AGO2Q9UKV8 859 aaKnown RBP13.78□□□□□ -0.2
USP28-212ENST00000544750 LHX6Q9UPM6 363 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 LOC400499M0QZD8 3231 aa13.78□□□□□ -0.2
USP28-212ENST00000544750 A0A0A0MRY4 1105 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 GABRDO14764 452 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 NFATC1O95644 943 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 ACAT1P24752 427 aaKnown RBP13.77□□□□□ -0.21
USP28-212ENST00000544750 PNPLA4P41247 253 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 PTGER3P43115 390 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 SEC13P55735 322 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 MAP7D1Q3KQU3 841 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 RILPL1Q5EBL4 403 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 SPDYCQ5MJ68 293 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 ARL6IP4Q66PJ3 421 aaKnown RBP13.77□□□□□ -0.21
USP28-212ENST00000544750 SLFN12LQ6IEE8 588 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 SYT12Q8IV01 421 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 SFTPA1Q8IWL2 248 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 CCDC33Q8N5R6 958 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 KIAA1958Q8N8K9 716 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 RLN3Q8WXF3 142 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 FUBP3Q96I24 572 aaKnown RBP eCLIP13.77□□□□□ -0.21
USP28-212ENST00000544750 CDK5RAP3Q96JB5 506 aa13.77□□□□□ -0.21
USP28-212ENST00000544750 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
USP28-212ENST00000544750 SGK1O00141 431 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 HCRTO43612 131 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 PPP1R37O75864 691 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 IL18RAPO95256 599 aa13.76□□□□□ -0.21
USP28-212ENST00000544750 CYP17A1P05093 508 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms