RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 TRIM72Q6ZMU5 477 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 C12orf50Q8NA57 414 aaPredicted RBP8.95□□□□□ -0.98
ABCB1-210ENST00000543898 ACER1Q8TDN7 264 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 GCNAQ96QF7 691 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 CRAMP1Q96RY5 1269 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 SRPK1Q96SB4 655 aaKnown RBP8.95□□□□□ -0.98
ABCB1-210ENST00000543898 ECSITQ9BQ95 431 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 PPCSQ9HAB8 311 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 PRM3Q9NNZ6 103 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 DMAP1Q9NPF5 467 aaPredicted RBP8.95□□□□□ -0.98
ABCB1-210ENST00000543898 FIS1Q9Y3D6 152 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 CASQ2O14958 399 aaPredicted RBP8.95□□□□□ -0.98
ABCB1-210ENST00000543898 KCNN4O15554 427 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 ATP6V1G1O75348 118 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 TCN1P20061 433 aaPredicted RBP8.95□□□□□ -0.98
ABCB1-210ENST00000543898 NPTX2P47972 431 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 RARRES1P49788 294 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 PSMC5P62195 406 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 LPCAT4Q643R3 524 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 KRT80Q6KB66 452 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 CCDC33Q8N5R6 958 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 GSTCDQ8NEC7 633 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 USP6NLQ92738 828 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 ZNF668Q96K58 619 aaPredicted RBP8.95□□□□□ -0.98
ABCB1-210ENST00000543898 NACA2Q9H009 215 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 APPL1Q9UKG1 709 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 PRPF4O43172 522 aaKnown RBP eCLIP8.95□□□□□ -0.98
ABCB1-210ENST00000543898 PSMD10O75832 226 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 DGKIO75912 1065 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 HSPA4LO95757 839 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 KRT7P08729 469 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 ABHD2P08910 425 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 EFHC1Q5JVL4 640 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 RBM15BQ8NDT2 890 aaKnown RBP8.95□□□□□ -0.98
ABCB1-210ENST00000543898 GDPD5Q8WTR4 605 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 CDKL2Q92772 493 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 AGBL1Q96MI9 1066 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 FERMT1Q9BQL6 677 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 MXRA8Q9BRK3 442 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 RAVER2Q9HCJ3 691 aaKnown RBP8.95□□□□□ -0.98
ABCB1-210ENST00000543898 DDX56Q9NY93 547 aaKnown RBP8.95□□□□□ -0.98
ABCB1-210ENST00000543898 SHOC2Q9UQ13 582 aa8.95□□□□□ -0.98
ABCB1-210ENST00000543898 KBTBD13C9JR72 458 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 NEMP1O14524 444 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 HNRNPRO43390 633 aaKnown RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 CCNFP41002 786 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 HADHBP55084 474 aaKnown RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 UBAP2LQ14157 1087 aaKnown RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 R3HDM1Q15032 1099 aaKnown RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 TMCO4Q5TGY1 634 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 OR6B2Q6IFH4 312 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 GPAT2Q6NUI2 795 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 ZC3H3Q8IXZ2 948 aaKnown RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 EMC1Q8N766 993 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 PSPC1Q8WXF1 523 aaKnown RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 ATP6V0A1Q93050 837 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 RMDN3Q96TC7 470 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 KLHL4Q9C0H6 718 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 SOCS7O14512 581 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 ALOX15BO15296 676 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 CLPTM1O96005 669 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 PROCP04070 461 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 COPAP53621 1224 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 MAMLD1Q13495 774 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 ART3Q13508 389 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 MTHFD1LQ6UB35 978 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 DNAJC14Q6Y2X3 702 aaPredicted RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 MARK2Q7KZI7 788 aaKnown RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 ULK2Q8IYT8 1036 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 TUBGCP5Q96RT8 1024 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 HERPUD2Q9BSE4 406 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 KLC2Q9H0B6 622 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 PCDH9Q9HC56 1237 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 DMAC2Q9NW81 257 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 DTNAQ9Y4J8 743 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 PRPSAP2O60256 369 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 T-ENOLP0DO92 83 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 HIRAP54198 1017 aaPredicted RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 RTP1P59025 263 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 BST1Q10588 318 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 TTC39BQ5VTQ0 682 aaPredicted RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 MCF2L2Q86YR7 1114 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 THNSL1Q8IYQ7 743 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 DEFB107AQ8IZN7 70 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 C7orf43Q8WVR3 580 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 TMEM143Q96AN5 459 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 BORCS6Q96GS4 357 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 SCYL1Q96KG9 808 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 PHACTR1Q9C0D0 580 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 MMADHCQ9H3L0 296 aaPredicted RBP8.94□□□□□ -0.98
ABCB1-210ENST00000543898 DNAJC16Q9Y2G8 782 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 PCDHAC2Q9Y5I4 1007 aa8.94□□□□□ -0.98
ABCB1-210ENST00000543898 PRR5-ARHGAP8B1AHC4 643 aa8.93□□□□□ -0.98
ABCB1-210ENST00000543898 XPO1O14980 1071 aaKnown RBP8.93□□□□□ -0.98
ABCB1-210ENST00000543898 GRAP2O75791 330 aa8.93□□□□□ -0.98
ABCB1-210ENST00000543898 ZMPSTE24O75844 475 aa8.93□□□□□ -0.98
ABCB1-210ENST00000543898 IGBP1P78318 339 aa8.93□□□□□ -0.98
ABCB1-210ENST00000543898 ARHGAP8P85298 464 aa8.93□□□□□ -0.98
ABCB1-210ENST00000543898 OCRLQ01968 901 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms