RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 MAGEC2Q9UBF1 373 aaPredicted RBP12.9□□□□□ -0.34
PTPN6-220ENST00000543115 UXTQ9UBK9 157 aaPredicted RBP12.9□□□□□ -0.34
PTPN6-220ENST00000543115 SERTAD1Q9UHV2 236 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 WDR87Q6ZQQ6 2873 aa12.9□□□□□ -0.34
PTPN6-220ENST00000543115 OBSL1O75147 1896 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 EP300Q09472 2414 aaPredicted RBP12.89□□□□□ -0.35
PTPN6-220ENST00000543115 PVALEFA0A1B0GWK0 134 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 SOBPA7XYQ1 873 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 HRO43593 1189 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 KLRC4O43908 158 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 PAPSS2O95340 614 aaPredicted RBP12.89□□□□□ -0.35
PTPN6-220ENST00000543115 CASP4P49662 377 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 USP46P62068 366 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 FOXK2Q01167 660 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 FAM160A1Q05DH4 1040 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 ZNF268Q14587 947 aaPredicted RBP12.89□□□□□ -0.35
PTPN6-220ENST00000543115 MTF1Q14872 753 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 ZNF77Q15935 545 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 KNOP1Q1ED39 458 aaKnown RBP12.89□□□□□ -0.35
PTPN6-220ENST00000543115 TMEM196Q5HYL7 178 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
PTPN6-220ENST00000543115 C4orf50Q6ZRC1 276 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 HS2ST1Q7LGA3 356 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 ARL14EPQ8N8R7 260 aaPredicted RBP12.89□□□□□ -0.35
PTPN6-220ENST00000543115 TTC16Q8NEE8 873 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 FNBP1Q96RU3 617 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 PARD6AQ9NPB6 346 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 TMEM30AQ9NV96 361 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 DLL3Q9NYJ7 618 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 GCNT4Q9P109 453 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 RCOR1Q9UKL0 485 aa12.89□□□□□ -0.35
PTPN6-220ENST00000543115 TRAV19A0A0A6YYK7 116 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 TRDMT1O14717 391 aaKnown RBP12.88□□□□□ -0.35
PTPN6-220ENST00000543115 ACTN4O43707 911 aaKnown RBP12.88□□□□□ -0.35
PTPN6-220ENST00000543115 TACC1O75410 805 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 CKMP06732 381 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 GRIK1P39086 918 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 CACNA2D1P54289 1103 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 MYL6P60660 151 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
PTPN6-220ENST00000543115 ZXDBP98169 803 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 STK4Q13043 487 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 USP4Q13107 963 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 RSPO4Q2I0M5 234 aaPredicted RBP12.88□□□□□ -0.35
PTPN6-220ENST00000543115 WDR72Q3MJ13 1102 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 MDH1BQ5I0G3 518 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 ATL3Q6DD88 541 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 CC2D1AQ6P1N0 951 aaPredicted RBP12.88□□□□□ -0.35
PTPN6-220ENST00000543115 VSTM1Q6UX27 236 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 PRR23BQ6ZRT6 265 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 C12orf56Q8IXR9 622 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 SYNPOQ8N3V7 929 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 KIAA0895Q8NCT3 520 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 MYCBPAPQ8TBZ2 947 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 ELMO3Q96BJ8 720 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 SPATA17Q96L03 361 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 XYLT2Q9H1B5 865 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 WNT6Q9Y6F9 365 aa12.88□□□□□ -0.35
PTPN6-220ENST00000543115 MED19A0JLT2 244 aaPredicted RBP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 F8VP50 259 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 EXOC3O60645 756 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 EGFP01133 1207 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 USP17L7P0C7H9 530 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 SLFN14P0C7P3 912 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 GJA4P35212 333 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 GNL1P36915 607 aaPredicted RBP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 GALK1P51570 392 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 SPEM2Q0P670 501 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 SIM2Q14190 667 aaPredicted RBP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 PUM1Q14671 1186 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 PDGFRLQ15198 375 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 MAPRE1Q15691 268 aaKnown RBP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 DENND5BQ6ZUT9 1274 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 LONP2Q86WA8 852 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 CEP57L1Q8IYX8 460 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 SH3RF2Q8TEC5 729 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 OSCP1Q8WVF1 389 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 EZH1Q92800 747 aaPredicted RBP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 SECISBP2LQ93073 1101 aaKnown RBP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 PAGE5Q96GU1 130 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 ZNF518BQ9C0D4 1074 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 ECT2Q9H8V3 914 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 POLR3BQ9NW08 1133 aaPredicted RBP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 DUS2Q9NX74 493 aaKnown RBP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
PTPN6-220ENST00000543115 GMEB2Q9UKD1 530 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 CFAP45Q9UL16 551 aa12.87□□□□□ -0.35
PTPN6-220ENST00000543115 F5P12259 2224 aa12.86□□□□□ -0.35
PTPN6-220ENST00000543115 DENND4CQ5VZ89 1909 aa12.86□□□□□ -0.35
PTPN6-220ENST00000543115 A0A1B0GVL5 298 aa12.86□□□□□ -0.35
PTPN6-220ENST00000543115 LRRIQ3A6PVS8 624 aaPredicted RBP12.86□□□□□ -0.35
PTPN6-220ENST00000543115 CLDN5O00501 218 aa12.86□□□□□ -0.35
PTPN6-220ENST00000543115 RNF40O75150 1001 aa12.86□□□□□ -0.35
PTPN6-220ENST00000543115 STAU1O95793 577 aaKnown RBP12.86□□□□□ -0.35
PTPN6-220ENST00000543115 PFKFB1P16118 471 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms