RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 EURLQ9NYK6 297 aa14.38□□□□□ -0.11
SLC3A2-220ENST00000542922 GGA2Q9UJY4 613 aa14.38□□□□□ -0.11
SLC3A2-220ENST00000542922 PNMA3Q9UL41 463 aa14.38□□□□□ -0.11
SLC3A2-220ENST00000542922 TPX2Q9ULW0 747 aaKnown RBP14.38□□□□□ -0.11
SLC3A2-220ENST00000542922 HES2Q9Y543 173 aa14.38□□□□□ -0.11
SLC3A2-220ENST00000542922 RBM47A0AV96 593 aaKnown RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 E5RJQ4 531 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 HCRTO43612 131 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 ATP2C2O75185 946 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 ITGAVP06756 1048 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 PFKMP08237 780 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 VIMP08670 466 aaKnown RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 RGS7P49802 495 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 LMNB2Q03252 620 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 TMED2Q15363 201 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 TTC31Q49AM3 519 aaPredicted RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 CYP4V2Q6ZWL3 525 aaPredicted RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 RELL1Q8IUW5 271 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 CCDC13Q8IYE1 715 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 PRCCQ92733 491 aaPredicted RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 MCRS1Q96EZ8 462 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 ZMAT2Q96NC0 199 aaKnown RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 FAM49AQ9H0Q0 323 aaPredicted RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 CCDC134Q9H6E4 229 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 CDHR5Q9HBB8 845 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 SETD4Q9NVD3 440 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 GJD2Q9UKL4 321 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 DRG1Q9Y295 367 aaKnown RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 CCL15-CCL14A0A0B4J2E2 113 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 DNM1LO00429 736 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 TCEA3O75764 348 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 PIAS1O75925 651 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 NPTXRO95502 500 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 MMP3P08254 477 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 BRAFP15056 766 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 ZNF268Q14587 947 aaPredicted RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 CCL15Q16663 113 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 DPY19L2Q6NUT2 758 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 NPNTQ6UXI9 565 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 FAM183BPQ6ZVS7 135 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 ANKMY2Q8IV38 441 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 FNIP1Q8TF40 1166 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 MRRFQ96E11 262 aaKnown RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 ACAP3Q96P50 834 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 ELAC2Q9BQ52 826 aaKnown RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 MRPL45Q9BRJ2 306 aaKnown RBP14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 ADPGKQ9BRR6 497 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 VRTNQ9H8Y1 702 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 PCDH9Q9HC56 1237 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 LGALS13Q9UHV8 139 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 TSPAN16Q9UKR8 245 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 CENPFP49454 3210 aa14.37□□□□□ -0.11
SLC3A2-220ENST00000542922 A0A1B0GUA9 196 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 TCRBV7S3A2A0A539 114 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 VDRP11473 427 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 ATICP31939 592 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 GABRB2P47870 512 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 GSCP56915 257 aaPredicted RBP14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 INCA1Q0VD86 236 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 MYO1EQ12965 1108 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 TAZQ16635 292 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 CDO1Q16878 200 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 CCDC142Q17RM4 750 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 MSS51Q4VC12 460 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 GLRA4Q5JXX5 417 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 BBS12Q6ZW61 710 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 TAX1BP1Q86VP1 789 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 RFX6Q8HWS3 928 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 UNC45BQ8IWX7 931 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 EMID1Q96A84 441 aaPredicted RBP14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 LENG1Q96BZ8 264 aaPredicted RBP14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 WDR83Q9BRX9 315 aaKnown RBP14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 EIF2AQ9BY44 585 aaKnown RBP14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 KIF9Q9HAQ2 790 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 CYP3A43Q9HB55 503 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 FAM49BQ9NUQ9 324 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 TUBGCP4Q9UGJ1 667 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 BARX2Q9UMQ3 279 aaPredicted RBP14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 DOCK3Q8IZD9 2030 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 COL1A2P08123 1366 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 FSBPO95073 299 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 TRUB2O95900 331 aaKnown RBP14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 KRT7P08729 469 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 CTCFP49711 727 aaPredicted RBP14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 CCNA1P78396 465 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 EFTUD2Q15029 972 aaKnown RBP eCLIP14.36□□□□□ -0.112e-14■■■■■ 66.3
SLC3A2-220ENST00000542922 HADHQ16836 314 aaKnown RBP14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 GOLGA7BQ2TAP0 167 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 CCDC121Q6ZUS5 278 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 GPR142Q7Z601 462 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 PIGWQ7Z7B1 504 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 ZBED8Q8IZ13 594 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 KCTD6Q8NC69 237 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 C18orf25Q96B23 403 aaPredicted RBP14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 CALN1Q9BXU9 219 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 FGFR1OP2Q9NVK5 253 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 SNTG2Q9NY99 539 aa14.36□□□□□ -0.11
SLC3A2-220ENST00000542922 ITGA11Q9UKX5 1188 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms