RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ZNF143P52747 638 aaPredicted RBP14.91□□□□□ -0.02
LDB3-207ENST00000542786 SLMAPQ14BN4 828 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 TRIP13Q15645 432 aaPredicted RBP14.91□□□□□ -0.02
LDB3-207ENST00000542786 TRIB2Q92519 343 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 LPIN3Q9BQK8 851 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 APOL6Q9BWW8 343 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 ARHGAP39Q9C0H5 1083 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 SYNCQ9H7C4 482 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 KLK14Q9P0G3 267 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 DRG1Q9Y295 367 aaKnown RBP14.91□□□□□ -0.02
LDB3-207ENST00000542786 RIPK2O43353 540 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 CA12O43570 354 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 ENDOD1O94919 500 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 TRUB2O95900 331 aaKnown RBP14.9□□□□□ -0.02
LDB3-207ENST00000542786 KRT7P08729 469 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 GNAT1P11488 350 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 ATF2P15336 505 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 MIPP30301 263 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 PCK1P35558 622 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 RPL34P49207 117 aaKnown RBP14.9□□□□□ -0.02
LDB3-207ENST00000542786 ITGA8P53708 1063 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 VCPP55072 806 aaKnown RBP14.9□□□□□ -0.02
LDB3-207ENST00000542786 SREBF2Q12772 1141 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 CALCOCO2Q13137 446 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 SLC29A2Q14542 456 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 DNAJC21Q5F1R6 531 aaKnown RBP14.9□□□□□ -0.02
LDB3-207ENST00000542786 FAM102AQ5T9C2 384 aaPredicted RBP14.9□□□□□ -0.02
LDB3-207ENST00000542786 KAZNQ674X7 775 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 PMF1Q6P1K2 205 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 TAF2Q6P1X5 1199 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 OLFML1Q6UWY5 402 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 BBS12Q6ZW61 710 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 TMEM110Q86TL2 294 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 CRYBG2Q8N1P7 616 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 ALLCQ8N6M5 410 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 C7orf31Q8N865 590 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 GLIS1Q8NBF1 620 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 WNT8BQ93098 351 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 PKNOX2Q96KN3 472 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 CNPY3Q9BT09 278 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 MTG1Q9BT17 334 aaPredicted RBP14.9□□□□□ -0.02
LDB3-207ENST00000542786 CAPS2Q9BXY5 557 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 TRIM6Q9C030 488 aaPredicted RBP14.9□□□□□ -0.02
LDB3-207ENST00000542786 DPEP3Q9H4B8 488 aa14.9□□□□□ -0.02
LDB3-207ENST00000542786 DCDC2CA8MYV0 355 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 PTGESO14684 152 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 ATF7P17544 494 aaPredicted RBP14.89□□□□□ -0.03
LDB3-207ENST00000542786 KDELR1P24390 212 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 ARSEP51690 589 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 MRPS6P82932 125 aaKnown RBP14.89□□□□□ -0.03
LDB3-207ENST00000542786 CAV1Q03135 178 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 TAF5Q15542 800 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 RAB6CQ53S08 254 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 FBXO47Q5MNV8 452 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 DENND2CQ68D51 928 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 TRMT10CQ7L0Y3 403 aaKnown RBP14.89□□□□□ -0.03
LDB3-207ENST00000542786 PRUNE1Q86TP1 453 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 IPO4Q8TEX9 1081 aaKnown RBP14.89□□□□□ -0.03
LDB3-207ENST00000542786 STK32AQ8WU08 396 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 CCDC114Q96M63 670 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 RAB6CQ9H0N0 254 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 ADAM7Q9H2U9 754 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 GTF2IRD1Q9UHL9 959 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 GABRQQ9UN88 632 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 GOLGA6L10A6NI86 522 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 CD48P09326 243 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 GPD1P21695 349 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 CAP1Q01518 475 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 BYSLQ13895 437 aaKnown RBP14.89□□□□□ -0.03
LDB3-207ENST00000542786 CCDC142Q17RM4 750 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 SMTNL2Q2TAL5 461 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 KRT71Q3SY84 523 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 TNFAIP8L3Q5GJ75 292 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 SH3PXD2AQ5TCZ1 1133 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 HIBCHQ6NVY1 386 aaPredicted RBP14.89□□□□□ -0.03
LDB3-207ENST00000542786 DPH6Q7L8W6 267 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 CCDC89Q8N998 374 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 RXFP2Q8WXD0 754 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 PPP1R10Q96QC0 940 aaKnown RBP14.89□□□□□ -0.03
LDB3-207ENST00000542786 TRAIPQ9BWF2 469 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 ZWILCHQ9H900 591 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 FAM49BQ9NUQ9 324 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 SLC12A6Q9UHW9 1150 aa14.89□□□□□ -0.03
LDB3-207ENST00000542786 KPNA7A9QM74 516 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 EIF3HO15372 352 aaKnown RBP eCLIP14.88□□□□□ -0.03
LDB3-207ENST00000542786 PAPSS1O43252 624 aaPredicted RBP14.88□□□□□ -0.03
LDB3-207ENST00000542786 CAND2O75155 1236 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 ITGAVP06756 1048 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 C6orf222P0C671 652 aaPredicted RBP14.88□□□□□ -0.03
LDB3-207ENST00000542786 LRPAP1P30533 357 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 ADCY8P40145 1251 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 RGS7P49802 495 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 ATP1A2P50993 1020 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 ZSCAN26Q16670 478 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 HADHQ16836 314 aaKnown RBP14.88□□□□□ -0.03
LDB3-207ENST00000542786 NBPF20Q3BBV1 942 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 KCNT1Q5JUK3 1230 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 ZNF618Q5T7W0 954 aa14.88□□□□□ -0.03
LDB3-207ENST00000542786 GDF6Q6KF10 455 aaPredicted RBP14.88□□□□□ -0.03
LDB3-207ENST00000542786 RELL1Q8IUW5 271 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms