RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TSSK1BQ9BXA7 367 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 TMEM120AQ9BXJ8 343 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 RNF19AQ9NV58 838 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.06■□□□□ 0.165e-8■■■□□ 19.1
CNOT9-208ENST00000542068 ACTL7BQ9Y614 415 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 FAM237BA0A1B0GVD1 139 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 LPXNO60711 386 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 AP1G2O75843 785 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 TMEM191BP0C7N4 346 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 UBTFL6P0CB48 400 aaPredicted RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 GNAT1P11488 350 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 RAP1GAPP47736 663 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 STAT5BP51692 787 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 MYL6P60660 151 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 SARNPP82979 210 aaKnown RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 SATB1Q01826 763 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 LMNB2Q03252 620 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 RCOR2Q8IZ40 523 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 TTC25Q96NG3 672 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 CALN1Q9BXU9 219 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 TRIM55Q9BYV6 548 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 SLC13A1Q9BZW2 595 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 KANSL3Q9P2N6 904 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 IP6K2Q9UHH9 426 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 BRWD3Q6RI45 1802 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 F5H423 210 aaPredicted RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 TYROBPO43914 113 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 SUPT20HL2P0C7V6 817 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 VCPP55072 806 aaKnown RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 KDSRQ06136 332 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 THOC5Q13769 683 aaKnown RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 SUPT20HL1Q3ZLR7 823 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 ACSBG2Q5FVE4 666 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 RNASEH2BQ5TBB1 312 aaKnown RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 CDCA2Q69YH5 1023 aaPredicted RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 POTEAQ6S8J7 498 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 RINLQ6ZS11 566 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 ALYREFQ86V81 257 aaKnown RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 CCDC33Q8N5R6 958 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 SLC25A41Q8N5S1 370 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 RBM41Q96IZ5 413 aaKnown RBP16.06■□□□□ 0.16
CNOT9-208ENST00000542068 CLPTM1LQ96KA5 538 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 WASF2Q9Y6W5 498 aa16.06■□□□□ 0.16
CNOT9-208ENST00000542068 NFKBIEO00221 500 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 PRPF4O43172 522 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■■■■□ 21.2
CNOT9-208ENST00000542068 OATP04181 439 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 ENO1P06733 434 aaKnown RBP16.05■□□□□ 0.16
CNOT9-208ENST00000542068 KLC1Q07866 573 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 ZNF252P-AS1Q0IIN9 211 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 GRIK3Q13003 919 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 RIBC1Q8N443 379 aaPredicted RBP16.05■□□□□ 0.16
CNOT9-208ENST00000542068 SCG3Q8WXD2 468 aaKnown RBP16.05■□□□□ 0.16
CNOT9-208ENST00000542068 FAM161BQ96MY7 647 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 RABGEF1Q9UJ41 708 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 SCINQ9Y6U3 715 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.05■□□□□ 0.16
CNOT9-208ENST00000542068 LTBP1Q14766 1721 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 ALOX15BO15296 676 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 LYPLA2O95372 231 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 PYGBP11216 843 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 PSMA2P25787 234 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 TCF7P36402 384 aaPredicted RBP16.05■□□□□ 0.16
CNOT9-208ENST00000542068 CDH8P55286 799 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 TAF5Q15542 800 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 ZACNQ401N2 412 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 GPAT2Q6NUI2 795 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 C4orf50Q6ZRC1 276 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 TEKT4Q8WW24 435 aa16.05■□□□□ 0.16
CNOT9-208ENST00000542068 XPO7Q9UIA9 1087 aaKnown RBP16.05■□□□□ 0.16
CNOT9-208ENST00000542068 MYL2P10916 166 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 ATP6V1C1P21283 382 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 ACO1P21399 889 aaKnown RBP16.04■□□□□ 0.16
CNOT9-208ENST00000542068 IRX1P78414 480 aaPredicted RBP16.04■□□□□ 0.16
CNOT9-208ENST00000542068 LRRC36Q1X8D7 754 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 TREML2Q5T2D2 321 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 MOB2Q70IA6 237 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 UNC45BQ8IWX7 931 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 INPP5DQ92835 1189 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 CDHR1Q96JP9 859 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 CEP350Q5VT06 3117 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 LRRC37AA6NMS7 1700 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 ABHD2P08910 425 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 ZCCHC18P0CG32 403 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 ARL4CP56559 192 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 FAAP100Q0VG06 881 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 MORF4L2Q15014 288 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 PLEKHA7Q6IQ23 1121 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 CCDC62Q6P9F0 684 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 ENOSF1Q7L5Y1 443 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 TTC1Q99614 292 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 HAPLN2Q9GZV7 340 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 IQCGQ9H095 443 aaKnown RBP16.04■□□□□ 0.16
CNOT9-208ENST00000542068 HOXC10Q9NYD6 342 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 LRRC42Q9Y546 428 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 H3BRJ5 948 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 CDO1Q16878 200 aa16.04■□□□□ 0.16
CNOT9-208ENST00000542068 TFDP3Q5H9I0 405 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms