RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MPZL3Q6UWV2 235 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 KCTD17Q8N5Z5 321 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 SLC7A14Q8TBB6 771 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 BFARQ9NZS9 450 aa16.81■□□□□ 0.28
VARS2-212ENST00000542001 SMG5Q9UPR3 1016 aaKnown RBP16.81■□□□□ 0.28
VARS2-212ENST00000542001 PABPN1LA6NDY0 278 aaKnown RBP16.8■□□□□ 0.28
VARS2-212ENST00000542001 CFAP73A6NFT4 308 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 KCNK1O00180 336 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 HMBSP08397 361 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 NQO1P15559 274 aaKnown RBP16.8■□□□□ 0.28
VARS2-212ENST00000542001 CAPSQ13938 189 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 LRRC6Q86X45 466 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 FUKQ8N0W3 1084 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 GSDMBQ8TAX9 411 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 TRPM4Q8TD43 1214 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 RNF139Q8WU17 664 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 TELO2Q9Y4R8 837 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.8■□□□□ 0.28
VARS2-212ENST00000542001 ABCC6O95255 1503 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 IRF6O14896 467 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 HBP1O60381 514 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 MUTP22033 750 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 RPA3P35244 121 aaPredicted RBP16.8■□□□□ 0.28
VARS2-212ENST00000542001 MYBPC2Q14324 1141 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 CNGA2Q16280 664 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 PCSK7Q16549 785 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 DCAF12L1Q5VU92 463 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 PLEKHO2Q8TD55 490 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 RSAD1Q9HA92 442 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 TSPAN16Q9UKR8 245 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 LACTBL1A8MY62 500 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 MAP3K7O43318 606 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 NFICP08651 508 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 VCPP55072 806 aaKnown RBP16.8■□□□□ 0.28
VARS2-212ENST00000542001 JAM2P57087 298 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 PRPSAP1Q14558 356 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 ZACNQ401N2 412 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 TAF1BQ53T94 588 aaPredicted RBP16.8■□□□□ 0.28
VARS2-212ENST00000542001 TRIM42Q8IWZ5 723 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 SLC25A41Q8N5S1 370 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 SNTG2Q9NY99 539 aa16.8■□□□□ 0.28
VARS2-212ENST00000542001 A0A1W2PPM1 405 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 E5RJQ4 531 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 ALDH5A1P51649 535 aaPredicted RBP16.79■□□□□ 0.28
VARS2-212ENST00000542001 AP3M2P53677 418 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 EFHC2Q5JST6 749 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 RASSF3Q86WH2 238 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 CHST13Q8NET6 341 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 JOSD2Q8TAC2 188 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 HELQQ8TDG4 1101 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 PRMT7Q9NVM4 692 aaPredicted RBP16.79■□□□□ 0.28
VARS2-212ENST00000542001 TAP1Q03518 808 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 RDM1Q8NG50 284 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 ZNF669Q96BR6 464 aaPredicted RBP16.79■□□□□ 0.28
VARS2-212ENST00000542001 KBTBD13C9JR72 458 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 CLGNO14967 610 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 CHRNB2P17787 502 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 ACO1P21399 889 aaKnown RBP16.79■□□□□ 0.28
VARS2-212ENST00000542001 ELF1P32519 619 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 STX3Q13277 289 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 EFTUD2Q15029 972 aaKnown RBP eCLIP16.79■□□□□ 0.286e-9■■■■■ 35
VARS2-212ENST00000542001 ERMARDQ5T6L9 678 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 CXorf56Q9H5V9 222 aa16.79■□□□□ 0.28
VARS2-212ENST00000542001 MYH6P13533 1939 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 MYL2P10916 166 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 SKIP12755 728 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 DRD4P21917 467 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 GLRBP48167 497 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 ART3Q13508 389 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 FASTKD1Q53R41 847 aaKnown RBP16.78■□□□□ 0.28
VARS2-212ENST00000542001 JADE1Q6IE81 842 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 SLC9A9Q8IVB4 645 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 MREGQ8N565 214 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 FBXO41Q8TF61 875 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 SKA2Q8WVK7 121 aaPredicted RBP16.78■□□□□ 0.28
VARS2-212ENST00000542001 KAT2BQ92831 832 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 PDGFCQ9NRA1 345 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 RGL2O15211 777 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 GNL1P36915 607 aaPredicted RBP16.78■□□□□ 0.28
VARS2-212ENST00000542001 CUL3Q13618 768 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 METTL7BQ6UX53 244 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 PGM2Q96G03 612 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.78■□□□□ 0.28
VARS2-212ENST00000542001 WDR35Q9P2L0 1181 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 DNALI1O14645 258 aaPredicted RBP16.78■□□□□ 0.28
VARS2-212ENST00000542001 SNRPFP62306 86 aaKnown RBP16.78■□□□□ 0.28
VARS2-212ENST00000542001 VGLL4Q14135 290 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 TMEM176AQ96HP8 235 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 FSD1LQ9BXM9 530 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 STAP1Q9ULZ2 295 aa16.78■□□□□ 0.28
VARS2-212ENST00000542001 M0QYT0 321 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 MT-CO1P00395 513 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 TCF4P15884 667 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 NOMO3P69849 1222 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 FAAP100Q0VG06 881 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 XRRA1Q6P2D8 792 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 C16orf46Q6P387 395 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 CDKL3Q8IVW4 592 aaPredicted RBP16.77■□□□□ 0.28
VARS2-212ENST00000542001 KIAA0319LQ8IZA0 1049 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 LRRC43Q8N309 656 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms