RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 UBR7Q8N806 425 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 BEST2Q8NFU1 509 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 TRIM7Q9C029 511 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 L2HGDHQ9H9P8 463 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 RSAD1Q9HA92 442 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 ARGLU1Q9NWB6 273 aaPredicted RBP8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 ITGA11Q9UKX5 1188 aa8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 V9GYY5 206 aaPredicted RBP8.22□□□□□ -1.09
AC005840.3-201ENST00000541888 TSC2P49815 1807 aa8.21□□□□□ -1.09
AC005840.3-201ENST00000541888 FNDC1Q4ZHG4 1894 aaPredicted RBP8.21□□□□□ -1.09
AC005840.3-201ENST00000541888 PTPRSQ13332 1948 aa8.21□□□□□ -1.09
AC005840.3-201ENST00000541888 CEP290O15078 2479 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 A0A0U1RQF3 1178 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 TRIM43BA6NCK2 446 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 TMEM110-MUSTN1A8MSY1 372 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 NT5C1B-RDH14C9J2C7 533 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 TLR3O15455 904 aaKnown RBP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 ZC3H11AO75152 810 aaKnown RBP eCLIP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 DDHD2O94830 711 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 FTLP02792 175 aaPredicted RBP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 ATP1A1P05023 1023 aaKnown RBP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 ACRP10323 421 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 COL6A1P12109 1028 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 CAPN2P17655 700 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 CYP3A5P20815 502 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 RFX1P22670 979 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 BRCC3P46736 316 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 RAD23BP54727 409 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 ETF1P62495 437 aaKnown RBP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 RBP5P82980 135 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 PTPN11Q06124 597 aaPredicted RBP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 KIF5AQ12840 1032 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 NAA30Q147X3 362 aaPredicted RBP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 CYP4A22Q5TCH4 519 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 SVOPQ8N4V2 548 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 SLC4A11Q8NBS3 891 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 C1orf131Q8NDD1 294 aaKnown RBP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 UBA3Q8TBC4 463 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 ZNF606Q8WXB4 792 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 TRIM43Q96BQ3 446 aaPredicted RBP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 VWCEQ96DN2 955 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 B3GALT6Q96L58 329 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 BCO2Q9BYV7 579 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 MCOLN1Q9GZU1 580 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 RUBCNLQ9H714 662 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 SMARCAL1Q9NZC9 954 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 EHD2Q9NZN4 543 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 CYTH4Q9UIA0 394 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 MYO6Q9UM54 1294 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 UBQLN1Q9UMX0 589 aaKnown RBP8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 NENFQ9UMX5 172 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 L1RE1Q9UN81 338 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 COG5Q9UP83 839 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 VWA8A3KMH1 1905 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 TTC3P53804 2025 aa8.21□□□□□ -1.1
AC005840.3-201ENST00000541888 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 ANO9A1A5B4 782 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 DCDC2CA8MYV0 355 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 KPNA7A9QM74 516 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 C9IYK1 514 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 CDK2AP1O14519 115 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 ZNF185O15231 689 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 CCP110O43303 1012 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 ATP9BO43861 1147 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 URI1O94763 535 aaPredicted RBP8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 CSPG5O95196 566 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 THP07101 528 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 CCDC130P13994 396 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 KCNE1P15382 129 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 CSF2RAP15509 400 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 TBXAS1P24557 533 aaPredicted RBP8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 NOP2P46087 812 aaKnown RBP8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 PLA2G4AP47712 749 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 AP3M2P53677 418 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 LILRA4P59901 499 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 CDR2Q01850 454 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 PCBP1Q15365 356 aaKnown RBP eCLIP8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 DENND1BQ6P3S1 775 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 LYPD4Q6UWN0 246 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 OSTM1Q86WC4 334 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 ZNF295-AS1Q8N0V1 137 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 OR6B3Q8NGW1 331 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 KBTBD7Q8WVZ9 684 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 SECISBP2LQ93073 1101 aaKnown RBP8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 ARMC5Q96C12 935 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 HEXIM2Q96MH2 286 aaKnown RBP8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 C11orf70Q9BRQ4 267 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 RHOBTB2Q9BYZ6 727 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 PLEKHA5Q9HAU0 1116 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 RGS18Q9NS28 235 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 TMEM39AQ9NV64 488 aa8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 CWC15Q9P013 229 aaKnown RBP8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 FEZ2Q9UHY8 353 aaPredicted RBP8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 PRG3Q9Y2Y8 225 aaPredicted RBP8.2□□□□□ -1.1
AC005840.3-201ENST00000541888 VGLL3A8MV65 326 aa8.19□□□□□ -1.1
AC005840.3-201ENST00000541888 CLDN5O00501 218 aa8.19□□□□□ -1.1
AC005840.3-201ENST00000541888 PODXLO00592 558 aa8.19□□□□□ -1.1
AC005840.3-201ENST00000541888 PIRO00625 290 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms