RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SLC35F5Q8WV83 523 aa23.64■■□□□ 1.38
HOMER3-204ENST00000539827 CAVIN3Q969G5 261 aa23.64■■□□□ 1.38
HOMER3-204ENST00000539827 SENP8Q96LD8 212 aa23.64■■□□□ 1.38
HOMER3-204ENST00000539827 OSBPL8Q9BZF1 889 aa23.64■■□□□ 1.38
HOMER3-204ENST00000539827 NEUROG2Q9H2A3 272 aa23.64■■□□□ 1.38
HOMER3-204ENST00000539827 A0A0U1RQF3 1178 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 ATP2C2O75185 946 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 POMCP01189 267 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 SETSIPP0DME0 302 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 ACAT1P24752 427 aaKnown RBP23.63■■□□□ 1.37
HOMER3-204ENST00000539827 SNX1Q13596 522 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 CUL1Q13616 776 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 LRRC38Q5VT99 294 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 RCOR2Q8IZ40 523 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 FNIP1Q8TF40 1166 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 MAIP1Q8WWC4 291 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 SLC4A5Q9BY07 1137 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 PCYOX1Q9UHG3 505 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 GRAP2O75791 330 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 GABBR2O75899 941 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 ECHS1P30084 290 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 CCDC142Q17RM4 750 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 TRAF7Q6Q0C0 670 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 CCDC105Q8IYK2 499 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 C12orf50Q8NA57 414 aaPredicted RBP23.63■■□□□ 1.37
HOMER3-204ENST00000539827 SLC43A3Q8NBI5 491 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 TSEN2Q8NCE0 465 aaKnown RBP23.63■■□□□ 1.37
HOMER3-204ENST00000539827 SLC2A14Q8TDB8 520 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 SLITRK1Q96PX8 696 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 PAAF1Q9BRP4 392 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 TRAIPQ9BWF2 469 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 UBXN6Q9BZV1 441 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 MIS12Q9H081 205 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 RAB17Q9H0T7 212 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 ZWILCHQ9H900 591 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 CHST7Q9NS84 486 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 INPP5FQ9Y2H2 1132 aa23.63■■□□□ 1.37
HOMER3-204ENST00000539827 FRMPD3Q5JV73 1810 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 LRCH4O75427 683 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 CDR1P51861 262 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 PRMT2P55345 433 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 MFSD7Q6UXD7 560 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 ANKRD52Q8NB46 1076 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 C3orf58Q8NDZ4 430 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 ATG4AQ8WYN0 398 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 ERP44Q9BS26 406 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 LRRC19Q9H756 370 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 VIPAS39Q9H9C1 493 aa23.62■■□□□ 1.37
HOMER3-204ENST00000539827 R3HDM2Q9Y2K5 976 aaKnown RBP23.62■■□□□ 1.37
HOMER3-204ENST00000539827 MYCP01106 439 aaPredicted RBP23.61■■□□□ 1.37
HOMER3-204ENST00000539827 KAZNQ674X7 775 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 TRNP1Q6NT89 227 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 DSTYKQ6XUX3 929 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 RXFP2Q8WXD0 754 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 RAPGEF5Q92565 580 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 PGBD4Q96DM1 585 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 RBM41Q96IZ5 413 aaKnown RBP23.61■■□□□ 1.37
HOMER3-204ENST00000539827 TNIP3Q96KP6 325 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 DNAI2Q9GZS0 605 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.61■■□□□ 1.37
HOMER3-204ENST00000539827 FAM114A2Q9NRY5 505 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 RASAL2Q9UJF2 1139 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 TIMM13Q9Y5L4 95 aaPredicted RBP23.61■■□□□ 1.37
HOMER3-204ENST00000539827 H3BQF6 201 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 CAND2O75155 1236 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 KRT10P13645 584 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 GPD1P21695 349 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 IL1R2P27930 398 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 TKTP29401 623 aaKnown RBP23.61■■□□□ 1.37
HOMER3-204ENST00000539827 BST2Q10589 180 aaKnown RBP23.61■■□□□ 1.37
HOMER3-204ENST00000539827 NNTQ13423 1086 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 MBTPS1Q14703 1052 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 TAF5Q15542 800 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 ODF2Q5BJF6 829 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 DUPD1Q68J44 220 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 TMEM110Q86TL2 294 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 ECHDC2Q86YB7 292 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 SCUBE3Q8IX30 993 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 B3GALNT2Q8NCR0 500 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 SEC14L1Q92503 715 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 DCLK3Q9C098 648 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 DDX56Q9NY93 547 aaKnown RBP23.61■■□□□ 1.37
HOMER3-204ENST00000539827 PTPN22Q9Y2R2 807 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 SNX24Q9Y343 169 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 SQORQ9Y6N5 450 aa23.61■■□□□ 1.37
HOMER3-204ENST00000539827 ARVCFO00192 962 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 OAS2P29728 719 aaKnown RBP23.6■■□□□ 1.37
HOMER3-204ENST00000539827 CETN2P41208 172 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 FNTAP49354 379 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 BCAT1P54687 386 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 SLC25A11Q02978 314 aaKnown RBP23.6■■□□□ 1.37
HOMER3-204ENST00000539827 KLF1Q13351 362 aaPredicted RBP23.6■■□□□ 1.37
HOMER3-204ENST00000539827 SMTNL2Q2TAL5 461 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 SPOCD1Q6ZMY3 1216 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 FAM118BQ9BPY3 351 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 B3GNT5Q9BYG0 378 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 ACBD3Q9H3P7 528 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 PCSK1NQ9UHG2 260 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 PHF24Q9UPV7 400 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 LRRD1A4D1F6 860 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms