RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 SIGLEC16A6NMB1 481 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 TDRD15B5MCY1 1934 aaKnown RBP11.72□□□□□ -0.53
CTCFL-212ENST00000539382 ATP8B1O43520 1251 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 BEST1O76090 585 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 MYBL2P10244 700 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 KRT3P12035 628 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
CTCFL-212ENST00000539382 FAAP100Q0VG06 881 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 GRIK3Q13003 919 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 BRD3Q15059 726 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 RAB6CQ53S08 254 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 PLEKHG4Q58EX7 1191 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 DCUN1D2Q6PH85 259 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 SLC39A5Q6ZMH5 540 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 FUKQ8N0W3 1084 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 RTP3Q9BQQ7 232 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 RAB6CQ9H0N0 254 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 DDX47Q9H0S4 455 aaKnown RBP11.72□□□□□ -0.53
CTCFL-212ENST00000539382 SYNCQ9H7C4 482 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 SCN5AQ14524 2016 aa11.72□□□□□ -0.53
CTCFL-212ENST00000539382 KRIT1O00522 736 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 ENPP3O14638 875 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 INPPL1O15357 1258 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 GLI1P08151 1106 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 SLC1A1P43005 524 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 CCL23P55773 120 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 GSCP56915 257 aaPredicted RBP11.71□□□□□ -0.53
CTCFL-212ENST00000539382 TUBB4BP68371 445 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 ZNF268Q14587 947 aaPredicted RBP11.71□□□□□ -0.53
CTCFL-212ENST00000539382 TRADDQ15628 312 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 LONRF2Q1L5Z9 754 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 FAM183BPQ6ZVS7 135 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 KHSRPQ92945 711 aaKnown RBP eCLIP11.71□□□□□ -0.53
CTCFL-212ENST00000539382 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 CRTAC1Q9NQ79 661 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 TMEM30AQ9NV96 361 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 DDX43Q9NXZ2 648 aaKnown RBP11.71□□□□□ -0.53
CTCFL-212ENST00000539382 IP6K2Q9UHH9 426 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 STRIP2Q9ULQ0 834 aa11.71□□□□□ -0.53
CTCFL-212ENST00000539382 RAD51CO43502 376 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 GRAP2O75791 330 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 EOMESO95936 686 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 SKIP12755 728 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 PTPN1P18031 435 aaKnown RBP11.71□□□□□ -0.54
CTCFL-212ENST00000539382 GATMP50440 423 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 RABGGTBP53611 331 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 RWDD2BP57060 319 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 TUSC3Q13454 348 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 BFSP2Q13515 415 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 STILQ15468 1287 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 SH3PXD2AQ5TCZ1 1133 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 TMEM110Q86TL2 294 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 ANKRD52Q8NB46 1076 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 CLEC4CQ8WTT0 213 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 ACSF2Q96CM8 615 aaPredicted RBP11.71□□□□□ -0.54
CTCFL-212ENST00000539382 ZNF333Q96JL9 665 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 KLHL11Q9NVR0 708 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 HCSTQ9UBK5 93 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 DNAJB4Q9UDY4 337 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 PRDM4Q9UKN5 801 aa11.71□□□□□ -0.54
CTCFL-212ENST00000539382 MYBPHLA2RUH7 354 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 PAPSS1O43252 624 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-212ENST00000539382 SART1O43290 800 aaKnown RBP11.7□□□□□ -0.54
CTCFL-212ENST00000539382 GJC1P36383 396 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 TLE2Q04725 743 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 SIX1Q15475 284 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-212ENST00000539382 TERF2Q15554 542 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 TRIM60Q495X7 471 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 FAM102AQ5T9C2 384 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-212ENST00000539382 WDR93Q6P2C0 686 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 OLFML1Q6UWY5 402 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 DSTYKQ6XUX3 929 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 ANKRD33Q7Z3H0 272 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 GSPT2Q8IYD1 628 aaKnown RBP11.7□□□□□ -0.54
CTCFL-212ENST00000539382 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-212ENST00000539382 VWCEQ96DN2 955 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 FUT8Q9BYC5 575 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 PPP1R12CQ9BZL4 782 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 UBN1Q9NPG3 1134 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 TARSL2A2RTX5 802 aaKnown RBP11.7□□□□□ -0.54
CTCFL-212ENST00000539382 IL1R2P27930 398 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 CYP2C18P33260 490 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 MAN1A1P33908 653 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 FLT3P36888 993 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 CACNA2D1P54289 1103 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 DSC1Q08554 894 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 MDH1BQ5I0G3 518 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 NOMO2Q5JPE7 1267 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 OR6B2Q6IFH4 312 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 C8orf74Q6P047 294 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 GLB1LQ6UWU2 654 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 ZNF771Q7L3S4 317 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-212ENST00000539382 CRIPAKQ8N1N5 446 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 NIPA2Q8N8Q9 360 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 PRELID2Q8N945 189 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 TNIP3Q96KP6 325 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 MIS12Q9H081 205 aa11.7□□□□□ -0.54
CTCFL-212ENST00000539382 HIPK3Q9H422 1215 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms