RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 hCG_2014768A0A024R1R8 64 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 CAP2P40123 477 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 PDK1Q15118 436 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 XRRA1Q6P2D8 792 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 ZNF669Q96BR6 464 aaPredicted RBP15.13■□□□□ 0.01
CACNB1-206ENST00000539338 C17orf75Q9HAS0 396 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 CASS4Q9NQ75 786 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 ERAP1Q9NZ08 941 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 STX18Q9P2W9 335 aaKnown RBP15.13■□□□□ 0.01
CACNB1-206ENST00000539338 ARHGAP23Q9P227 1491 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 NPTXRO95502 500 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 ITGA4P13612 1032 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 TBX2Q13207 712 aaPredicted RBP15.13■□□□□ 0.01
CACNB1-206ENST00000539338 IKBKEQ14164 716 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 RDM1Q8NG50 284 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 RFWD2Q8NHY2 731 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 HDAC7Q8WUI4 952 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 SHCBP1LQ9BZQ2 653 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 CDC42EP4Q9H3Q1 356 aaKnown RBP15.13■□□□□ 0.01
CACNB1-206ENST00000539338 KIF17Q9P2E2 1029 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 GRID1Q9ULK0 1009 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 PHTF1Q9UMS5 762 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 KIF1AQ12756 1690 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 TMEM247A6NEH6 219 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 PDAP1Q13442 181 aaKnown RBP15.12■□□□□ 0.01
CACNB1-206ENST00000539338 MED21Q13503 144 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 UGP2Q16851 508 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 Q4G0T1 1027 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 GRAMD4Q6IC98 578 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 PNMA5Q96PV4 448 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 DUSP9Q99956 384 aaKnown RBP15.12■□□□□ 0.01
CACNB1-206ENST00000539338 ARHGAP10A1A4S6 786 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 HBP1O60381 514 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 KLC1Q07866 573 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 TRIP10Q15642 601 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 IFNEQ86WN2 208 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 NLGN2Q8NFZ4 835 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 STAMBPL1Q96FJ0 436 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 NOD2Q9HC29 1040 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 PHLPP1O60346 1717 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 CD4P01730 458 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 CYP2C9P11712 490 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 GLRA4Q5JXX5 417 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 DEFB128Q7Z7B8 93 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 C7orf61Q8IZ16 206 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 CYP2W1Q8TAV3 490 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 DNAJC9Q8WXX5 260 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 ELMO3Q96BJ8 720 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 NSL1Q96IY1 281 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 MRPL1Q9BYD6 325 aaKnown RBP15.12■□□□□ 0.01
CACNB1-206ENST00000539338 DOLKQ9UPQ8 538 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 RARGP13631 454 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 GNL1P36915 607 aaPredicted RBP15.12■□□□□ 0.01
CACNB1-206ENST00000539338 SOX10P56693 466 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 CYB5D1Q6P9G0 228 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 FBXO36Q8NEA4 188 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 DEFB118Q96PH6 123 aa15.12■□□□□ 0.01
CACNB1-206ENST00000539338 SCHIP1Q9P0W5 487 aaPredicted RBP15.12■□□□□ 0.01
CACNB1-206ENST00000539338 SMAPO00193 183 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 FKBP1AP62942 108 aaKnown RBP15.11■□□□□ 0.01
CACNB1-206ENST00000539338 NBPF12Q5TAG4 269 aaPredicted RBP15.11■□□□□ 0.01
CACNB1-206ENST00000539338 TTC30BQ8N4P2 665 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 ZDHHC15Q96MV8 337 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 SLC39A10Q9ULF5 831 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 SHPRHQ149N8 1683 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 KLHL2O95198 593 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 KCNA3P22001 575 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 SNX17Q15036 470 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 TMEM154Q6P9G4 183 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 KCNK16Q96T55 309 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 NWD1Q149M9 1564 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 NFIBO00712 420 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 SLC38A7Q9NVC3 462 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 AP3B1O00203 1094 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 AKAP10O43572 662 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 ACADSBP45954 432 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 MLLT1Q03111 559 aaPredicted RBP15.11■□□□□ 0.01
CACNB1-206ENST00000539338 PREPLQ4J6C6 727 aaPredicted RBP15.11■□□□□ 0.01
CACNB1-206ENST00000539338 PBXIP1Q96AQ6 731 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 ASPSCR1Q9BZE9 553 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 SYNDIG1Q9H7V2 258 aa15.11■□□□□ 0.01
CACNB1-206ENST00000539338 GZMAP12544 262 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 NCAM1P13591 858 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 RAD51Q06609 339 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 TMC7Q7Z402 723 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 ANKRD23Q86SG2 305 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 ARHGAP18Q8N392 663 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 GALNT4Q8N4A0 578 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 KRT35Q92764 455 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 WNK4Q96J92 1243 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 FAM129AQ9BZQ8 928 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 GPATCH2LQ9NWQ4 482 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 KLK14Q9P0G3 267 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 H7C4K7 107 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 OGTO15294 1046 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 PSMD3O43242 534 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 ZNF189O75820 626 aaPredicted RBP15.1■□□□□ 0.01
CACNB1-206ENST00000539338 OTUD4Q01804 1114 aaKnown RBP15.1■□□□□ 0.01
CACNB1-206ENST00000539338 KCNMA1Q12791 1236 aa15.1■□□□□ 0.01
CACNB1-206ENST00000539338 C6orf10Q5SRN2 563 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms