RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 VNN1O95497 513 aa15.98■□□□□ 0.15
RAB40B-202ENST00000538809 STAU1O95793 577 aaKnown RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 DDX6P26196 483 aaKnown RBP eCLIP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 WEE1P30291 646 aa15.98■□□□□ 0.15
RAB40B-202ENST00000538809 GNL1P36915 607 aaPredicted RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 AVPR1AP37288 418 aa15.98■□□□□ 0.15
RAB40B-202ENST00000538809 MAGEA11P43364 429 aa15.98■□□□□ 0.15
RAB40B-202ENST00000538809 RPS9P46781 194 aaKnown RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 CSTF1Q05048 431 aaKnown RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 NFIL3Q16649 462 aa15.98■□□□□ 0.15
RAB40B-202ENST00000538809 ZNF699Q32M78 642 aa15.98■□□□□ 0.15
RAB40B-202ENST00000538809 GUF1Q8N442 669 aaKnown RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 CELF5Q8N6W0 485 aaKnown RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 TTC16Q8NEE8 873 aa15.98■□□□□ 0.15
RAB40B-202ENST00000538809 RIN3Q8TB24 985 aa15.98■□□□□ 0.15
RAB40B-202ENST00000538809 USP13Q92995 863 aaPredicted RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 CCDC47Q96A33 483 aaKnown RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 SYAP1Q96A49 352 aaPredicted RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 TRMT2BQ96GJ1 504 aaKnown RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 PCED1BQ96HM7 432 aa15.98■□□□□ 0.15
RAB40B-202ENST00000538809 UXTQ9UBK9 157 aaPredicted RBP15.98■□□□□ 0.15
RAB40B-202ENST00000538809 EML5Q05BV3 1969 aa15.98■□□□□ 0.15
RAB40B-202ENST00000538809 RALGAPA1Q6GYQ0 2036 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 SPECC1L-ADORA2AF8WAN1 911 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 CALUO43852 315 aaPredicted RBP15.97■□□□□ 0.15
RAB40B-202ENST00000538809 TACC1O75410 805 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 CTHP32929 405 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 GRIK1P39086 918 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 MTAPQ13126 283 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 NCOA4Q13772 614 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 MAPRE1Q15691 268 aaKnown RBP15.97■□□□□ 0.15
RAB40B-202ENST00000538809 ZCWPW2Q504Y3 356 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 TXNDC11Q6PKC3 985 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 TSSK4Q6SA08 328 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 MON1AQ86VX9 555 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 MYCBPAPQ8TBZ2 947 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 CHRDQ9H2X0 955 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 VRTNQ9H8Y1 702 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 LMAN1LQ9HAT1 526 aa15.97■□□□□ 0.15
RAB40B-202ENST00000538809 RBM12Q9NTZ6 932 aaKnown RBP15.97■□□□□ 0.15
RAB40B-202ENST00000538809 A8MXQ7 604 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 CLDN5O00501 218 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 KIF20AO95235 890 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 C4BPAP04003 597 aaKnown RBP15.96■□□□□ 0.15
RAB40B-202ENST00000538809 FAM163BP0C2L3 166 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 PTPN1P18031 435 aaKnown RBP15.96■□□□□ 0.15
RAB40B-202ENST00000538809 ANXA13P27216 316 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 ATICP31939 592 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 CACNA2D1P54289 1103 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 CDH8P55286 799 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 MCCD1P59942 119 aaPredicted RBP15.96■□□□□ 0.15
RAB40B-202ENST00000538809 USP46P62068 366 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 PNOCQ13519 176 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 ZNF667Q5HYK9 610 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 WDR44Q5JSH3 913 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 C1orf220Q5T0J3 134 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 TRIM68Q6AZZ1 485 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 ZC3H14Q6PJT7 736 aaKnown RBP15.96■□□□□ 0.15
RAB40B-202ENST00000538809 VSTM1Q6UX27 236 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 ADSSL1Q8N142 457 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 SPATA20Q8TB22 786 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 MYRFLQ96LU7 910 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 SLC22A12Q96S37 553 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 ZNF518BQ9C0D4 1074 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 SDCBP2Q9H190 292 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 C8orf33Q9H7E9 229 aaPredicted RBP15.96■□□□□ 0.15
RAB40B-202ENST00000538809 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.96■□□□□ 0.152e-6■■■■■ 113.6
RAB40B-202ENST00000538809 PRMT8Q9NR22 394 aaPredicted RBP15.96■□□□□ 0.15
RAB40B-202ENST00000538809 GKN1Q9NS71 199 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 TDP1Q9NUW8 608 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 TMEM30AQ9NV96 361 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 ZMYM5Q9UJ78 669 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 FBXO4Q9UKT5 387 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 FRMD4BQ9Y2L6 1034 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 GVINP1Q7Z2Y8 2422 aa15.96■□□□□ 0.15
RAB40B-202ENST00000538809 OTOGLQ3ZCN5 2332 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 C2orf78A6NCI8 922 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 F8VP50 259 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 TRIM66O15016 1216 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 MAPK13O15264 365 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 CKMP06732 381 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 TRIM49P0CI25 452 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 TRIM49CP0CI26 452 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 CHRNB1P11230 501 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 NR2F2P24468 414 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 AP3M2P53677 418 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 PLCB2Q00722 1185 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 FAM160A1Q05DH4 1040 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 IFRD2Q12894 506 aaPredicted RBP15.95■□□□□ 0.14
RAB40B-202ENST00000538809 PON2Q15165 354 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 SMYD4Q8IYR2 804 aaPredicted RBP15.95■□□□□ 0.14
RAB40B-202ENST00000538809 ARL14EPQ8N8R7 260 aaPredicted RBP15.95■□□□□ 0.14
RAB40B-202ENST00000538809 B3GALNT2Q8NCR0 500 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 TMC2Q8TDI7 906 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 MSANTD3Q96H12 275 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 SPATA17Q96L03 361 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 CYP2S1Q96SQ9 504 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 B3GNT5Q9BYG0 378 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 EBF3Q9H4W6 596 aa15.95■□□□□ 0.14
RAB40B-202ENST00000538809 KIF9Q9HAQ2 790 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms