RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 MAGEB18Q96M61 343 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 CEP63Q96MT8 703 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 RBM15Q96T37 977 aaKnown RBP eCLIP3.9□□□□□ -1.79
MCF2-210ENST00000536274 SLC2A11Q9BYW1 496 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 SEMA6BQ9H3T3 888 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 XPNPEP1Q9NQW7 623 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 ARHGEF4Q9NR80 690 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 NDFIP2Q9NV92 336 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 TBC1D14Q9P2M4 693 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 SLC7A8Q9UHI5 535 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 BCAP29Q9UHQ4 241 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 NAALADL1Q9UQQ1 740 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.9□□□□□ -1.79
MCF2-210ENST00000536274 CROCCQ5TZA2 2017 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 SMIM31A0A1B0GVY4 71 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 BICDL2A1A5D9 508 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 KRBA1A5PL33 1030 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 ARHGAP42A6NI28 874 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 CNOT3O75175 753 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 CSF1RP07333 972 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 ZBTB48P10074 688 aaPredicted RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 KITP10721 976 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 PHBP35232 272 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 RPL5P46777 297 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 MXI1P50539 228 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 CCT8P50990 548 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 NCKAP1LP55160 1127 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 RACK1P63244 317 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 SLC25A3Q00325 362 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 BNIP3Q12983 259 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 RRP1BQ14684 758 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 SMU1Q2TAY7 513 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 PARP10Q53GL7 1025 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 TCHHL1Q5QJ38 904 aaPredicted RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 SIGIRRQ6IA17 410 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 CYP4F22Q6NT55 531 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 GJB7Q6PEY0 223 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 LYPD8Q6UX82 237 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 CYP4V2Q6ZWL3 525 aaPredicted RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 EPM2AIP1Q7L775 607 aaPredicted RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 METTL3Q86U44 580 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 NELFCDQ8IXH7 590 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 MYO1HQ8N1T3 1032 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 LZTR1Q8N653 840 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 RBM15BQ8NDT2 890 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 CCDC110Q8TBZ0 833 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 SUN5Q8TC36 379 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 HAUS7Q99871 368 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 DSCC1Q9BVC3 393 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 LSM14BQ9BX40 385 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 NAA50Q9GZZ1 169 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 MRPL46Q9H2W6 279 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 CYP4F11Q9HBI6 524 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 METTL14Q9HCE5 456 aaKnown RBP3.9□□□□□ -1.79
MCF2-210ENST00000536274 CNGB3Q9NQW8 809 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 NCKIPSDQ9NZQ3 722 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 TXNDC16Q9P2K2 825 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 PCDHA4Q9UN74 947 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 CDC14AQ9UNH5 594 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 CACNA1FO60840 1977 aa3.9□□□□□ -1.79
MCF2-210ENST00000536274 IGSF9BQ9UPX0 1349 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 GOLGA8TH3BQL2 631 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 AP3B1O00203 1094 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 GRM8O00222 908 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 KLRC4O43908 158 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 CCDC22O60826 627 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ZMPSTE24O75844 475 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 SCO1O75880 301 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 NOL4O94818 638 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ADH1BP00325 375 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PLCG1P19174 1290 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 EEF1GP26641 437 aaKnown RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 HOXD10P28358 340 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 SERPINB6P35237 376 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ARPP19P56211 112 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ZNF200P98182 395 aaPredicted RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 DNASE1L3Q13609 305 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 OASLQ15646 514 aaKnown RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 PPP2R5EQ16537 467 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PPP1R3AQ16821 1122 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 DEFB115Q30KQ5 88 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 NAALADL2Q58DX5 795 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PIK3AP1Q6ZUJ8 805 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 LPCAT2Q7L5N7 544 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 DYMQ7RTS9 669 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 CADM3Q8N126 398 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ANKRD36BP1Q96IX9 119 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 WNK4Q96J92 1243 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PLEKHA8Q96JA3 519 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 CDH19Q9H159 772 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 TIMMDC1Q9NPL8 285 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 AAASQ9NRG9 546 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ADARB2Q9NS39 739 aaKnown RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 NKIRAS1Q9NYS0 192 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 KLQ9UEF7 1012 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 MARCOQ9UEW3 520 aaPredicted RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 INPP5FQ9Y2H2 1132 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PCDHGA11Q9Y5H2 935 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 E5RJQ4 531 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 H7C0C1 242 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms