RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 BAG6P46379 1132 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 GABRB2P47870 512 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 OSTNP61366 133 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 KLHL38Q2WGJ6 581 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 CELF3Q5SZQ8 465 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 FNBP1LQ5T0N5 605 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 PDIK1LQ8N165 341 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 TRPM4Q8TD43 1214 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 TBC1D31Q96DN5 1066 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 MYCBPQ99417 103 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 DHRS4Q9BTZ2 278 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 MAK16Q9BXY0 300 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 INO80BQ9C086 356 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 GEMIN8Q9NWZ8 242 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 GGA3Q9NZ52 723 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 TJP2Q9UDY2 1190 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 GRID1Q9ULK0 1009 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 TNFSF13BQ9Y275 285 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 SRCAPQ6ZRS2 3230 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 STIP1P31948 543 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 MSH2P43246 934 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 SLC26A2P50443 739 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 SLC1A5Q15758 541 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 MSS51Q4VC12 460 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 ANKRD22Q5VYY1 191 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 PALM2Q8IXS6 379 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 ANKLE1Q8NAG6 615 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 SLCO1B3Q9NPD5 702 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 SIX4Q9UIU6 781 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 DCTN3O75935 186 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 CCND1P24385 295 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 CDH8P55286 799 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 PRKG1Q13976 671 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 TMEM132AQ24JP5 1023 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 KIF2BQ8N4N8 673 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 CEP120Q8N960 986 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 SLC4A11Q8NBS3 891 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 GIMAP7Q8NHV1 300 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 SPOCK2Q92563 424 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 ALKBH8Q96BT7 664 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 MRRFQ96E11 262 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 MCRS1Q96EZ8 462 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 RSAD1Q9HA92 442 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 EBF2Q9HAK2 575 aa16.8■□□□□ 0.28
CHMP1A-202ENST00000535997 BANF1O75531 89 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 ARIH2O95376 493 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 CD48P09326 243 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 ATP2A2P16615 1042 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 MIPP30301 263 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 RAP1GAPP47736 663 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 PTPN11Q06124 597 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 WDR78Q5VTH9 848 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 EEF1DP3Q658K8 133 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 LVRNQ6Q4G3 990 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 DEFB132Q7Z7B7 95 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 TRIM50Q86XT4 487 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 UNC45BQ8IWX7 931 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 EMC1Q8N766 993 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 FBXO36Q8NEA4 188 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 ZNF75CPQ92670 426 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 NLRP4Q96MN2 994 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 RAB3IPQ96QF0 476 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 MYLK2Q9H1R3 596 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 C10orf88Q9H8K7 445 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 ETNK1Q9HBU6 452 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 METTL5Q9NRN9 209 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 ASNSD1Q9NWL6 643 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 PCSK1NQ9UHG2 260 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 USP18Q9UMW8 372 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 B4GALT5O43286 388 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 TRUB2O95900 331 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 ERBB2P04626 1255 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 CXCL8P10145 99 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 PCK1P35558 622 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 PSMC4P43686 418 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 EIF3EP60228 445 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 GAD2Q05329 585 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 VGLL4Q14135 290 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 DPYSL3Q14195 570 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 SPDYAQ5MJ70 313 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 VSIG1Q86XK7 387 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 RFX6Q8HWS3 928 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 C1orf127Q8N9H9 656 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 AGAP11Q8TF27 550 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 TMEM176AQ96HP8 235 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 PAFAH2Q99487 392 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 NFKBIZQ9BYH8 718 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 CDT1Q9H211 546 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 CYP3A43Q9HB55 503 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 GPRC5DQ9NZD1 345 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 CHKBQ9Y259 395 aa16.79■□□□□ 0.28
CHMP1A-202ENST00000535997 BRCA1P38398 1863 aaKnown RBP16.78■□□□□ 0.28
CHMP1A-202ENST00000535997 SOCS7O14512 581 aa16.78■□□□□ 0.28
CHMP1A-202ENST00000535997 MCF2LO15068 1137 aa16.78■□□□□ 0.28
CHMP1A-202ENST00000535997 TM9SF1O15321 606 aa16.78■□□□□ 0.28
CHMP1A-202ENST00000535997 CILPO75339 1184 aa16.78■□□□□ 0.28
CHMP1A-202ENST00000535997 HMGCRP04035 888 aa16.78■□□□□ 0.28
CHMP1A-202ENST00000535997 RBP3P10745 1247 aa16.78■□□□□ 0.28
CHMP1A-202ENST00000535997 ATICP31939 592 aa16.78■□□□□ 0.28
CHMP1A-202ENST00000535997 MBTD1Q05BQ5 628 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms