RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDCA3-205ENST00000535871 TRIM62Q9BVG3 475 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 ELOVL4Q9GZR5 314 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 CXCL16Q9H2A7 254 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 CWH43Q9H720 699 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 GOLGA2P5Q9HBQ8 144 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 CSNK1G1Q9HCP0 422 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 CHST7Q9NS84 486 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 COMMD8Q9NX08 183 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 KIAA1522Q9P206 1035 aaPredicted RBP6.88□□□□□ -1.31
CDCA3-205ENST00000535871 POLIQ9UNA4 740 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 INPP5FQ9Y2H2 1132 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 PCDHB9Q9Y5E1 797 aa6.88□□□□□ -1.31
CDCA3-205ENST00000535871 CASTOR2A6NHX0 329 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 C5orf67F2Z3F1 127 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 CES2O00748 559 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 PPEF2O14830 753 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 XPO1O14980 1071 aaKnown RBP6.87□□□□□ -1.31
CDCA3-205ENST00000535871 TBC1D4O60343 1298 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 FBXO21O94952 628 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SOD2P04179 222 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 ERBB2P04626 1255 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 MMEP08473 750 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 HOXB1P14653 301 aaPredicted RBP6.87□□□□□ -1.31
CDCA3-205ENST00000535871 CD58P19256 250 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 CTHP32929 405 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 MAN1A1P33908 653 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 BMP8BP34820 402 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SLC1A1P43005 524 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 PLA2G4AP47712 749 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 OR1G1P47890 313 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SLC11A1P49279 550 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 GALCP54803 685 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 CDH8P55286 799 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 TUBB4BP68371 445 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 KRT17Q04695 432 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 MTF1Q14872 753 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 CLUL1Q15846 466 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 TCTN1Q2MV58 587 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 USP41Q3LFD5 358 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 INTS6LQ5JSJ4 861 aaKnown RBP6.87□□□□□ -1.31
CDCA3-205ENST00000535871 WSCD1Q658N2 575 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 TPGS2Q68CL5 300 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 ZNF280DQ6N043 979 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 C11orf63Q6NUN7 778 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 KCNT2Q6UVM3 1135 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDCA3-205ENST00000535871 ZNF365Q70YC5 407 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 C16orf59Q7L2K0 433 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SLFN11Q7Z7L1 901 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 DDX53Q86TM3 631 aaKnown RBP6.87□□□□□ -1.31
CDCA3-205ENST00000535871 MCOLN2Q8IZK6 566 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SLC39A11Q8N1S5 342 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 PLPP7Q8NBV4 271 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 C3orf20Q8ND61 904 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 KIF18AQ8NI77 898 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SPPL2BQ8TCT7 592 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 IPO4Q8TEX9 1081 aaKnown RBP6.87□□□□□ -1.31
CDCA3-205ENST00000535871 GIPC2Q8TF65 315 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SLC35F5Q8WV83 523 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 TFAP2BQ92481 460 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 BADQ92934 168 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SECISBP2LQ93073 1101 aaKnown RBP6.87□□□□□ -1.31
CDCA3-205ENST00000535871 CYFIP2Q96F07 1278 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 IGSF21Q96ID5 467 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 YME1L1Q96TA2 773 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 PKMYT1Q99640 499 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SYT15Q9BQS2 421 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 MRPL45Q9BRJ2 306 aaKnown RBP6.87□□□□□ -1.31
CDCA3-205ENST00000535871 TTPALQ9BTX7 342 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SLC4A5Q9BY07 1137 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 DUSP16Q9BY84 665 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 PDCL3Q9H2J4 239 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SCUBE2Q9NQ36 999 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 PARVAQ9NVD7 372 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 ASNSD1Q9NWL6 643 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 DDX43Q9NXZ2 648 aaKnown RBP6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SPG21Q9NZD8 308 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 EHD2Q9NZN4 543 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 FNIP2Q9P278 1114 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 JRKLQ9Y4A0 524 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 PAXBP1Q9Y5B6 917 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 PCDHB12Q9Y5F1 795 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 IRAK3Q9Y616 596 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 SLC4A7Q9Y6M7 1214 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 CEP290O15078 2479 aa6.87□□□□□ -1.31
CDCA3-205ENST00000535871 TCRBV5S1A1TA0A578 114 aa6.86□□□□□ -1.31
CDCA3-205ENST00000535871 SIGLEC16A6NMB1 481 aa6.86□□□□□ -1.31
CDCA3-205ENST00000535871 MIF4GDA9UHW6 222 aaKnown RBP6.86□□□□□ -1.31
CDCA3-205ENST00000535871 LZTS3O60299 673 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-205ENST00000535871 MICAL2O94851 1124 aa6.86□□□□□ -1.31
CDCA3-205ENST00000535871 CLSTN1O94985 981 aa6.86□□□□□ -1.31
CDCA3-205ENST00000535871 PNMA6AP0CW24 399 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-205ENST00000535871 CD19P15391 556 aa6.86□□□□□ -1.31
CDCA3-205ENST00000535871 ATP2A2P16615 1042 aaKnown RBP6.86□□□□□ -1.31
CDCA3-205ENST00000535871 ZNF16P17020 682 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-205ENST00000535871 NPR3P17342 541 aa6.86□□□□□ -1.31
CDCA3-205ENST00000535871 DESP17661 470 aa6.86□□□□□ -1.31
CDCA3-205ENST00000535871 CYP27A1Q02318 531 aa6.86□□□□□ -1.31
CDCA3-205ENST00000535871 DSG1Q02413 1049 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms