RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 MTHFD1LQ6UB35 978 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 WWP1Q9H0M0 922 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 KDM6AO15550 1401 aaPredicted RBP13.11□□□□□ -0.31
SPG11-203ENST00000535302 ENTPD3O75355 529 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 CD4P01730 458 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 FDX1P10109 184 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 TFE3P19532 575 aaPredicted RBP13.11□□□□□ -0.31
SPG11-203ENST00000535302 DNAJB2P25686 324 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 HARS2P49590 506 aaKnown RBP13.11□□□□□ -0.31
SPG11-203ENST00000535302 LAMC2Q13753 1193 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 ROGDIQ9GZN7 287 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 STRNO43815 780 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 KLRC1P26715 233 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 MAGEA4P43358 317 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 FNTAP49354 379 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 SDE2Q6IQ49 451 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 TC2NQ8N9U0 490 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 STKLD1Q8NE28 680 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 OPTNQ96CV9 577 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 NUDT12Q9BQG2 462 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 OSGEPL1Q9H4B0 414 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 PSMC3IPQ9P2W1 217 aaPredicted RBP13.11□□□□□ -0.31
SPG11-203ENST00000535302 F8W810 466 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 CSF1RP07333 972 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 NFIAQ12857 509 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 KLHDC7AQ5VTJ3 777 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 CARNMT1Q8N4J0 409 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 USP20Q9Y2K6 914 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 POLR1AO95602 1720 aaPredicted RBP13.11□□□□□ -0.31
SPG11-203ENST00000535302 TTLL13PA6NNM8 815 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 SLC44A4Q53GD3 710 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 CCDC149Q6ZUS6 474 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 OR8H2Q8N162 312 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 KRT78Q8N1N4 520 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 EXD1Q8NHP7 514 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 SEMA4DQ92854 862 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 NACC2Q96BF6 587 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 TRIM62Q9BVG3 475 aa13.11□□□□□ -0.31
SPG11-203ENST00000535302 RFC5P40937 340 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 ZNF669Q96BR6 464 aaPredicted RBP13.1□□□□□ -0.31
SPG11-203ENST00000535302 OLFML3Q9NRN5 406 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 ALG6Q9Y672 507 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 ZC3H11AO75152 810 aaKnown RBP eCLIP13.1□□□□□ -0.31
SPG11-203ENST00000535302 TARSP26639 723 aaKnown RBP13.1□□□□□ -0.31
SPG11-203ENST00000535302 SNX17Q15036 470 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 VPS72Q15906 364 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 CCDC92Q53HC0 331 aaPredicted RBP13.1□□□□□ -0.31
SPG11-203ENST00000535302 CCT7Q99832 543 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 CINPQ9BW66 212 aaPredicted RBP13.1□□□□□ -0.31
SPG11-203ENST00000535302 STMN3Q9NZ72 180 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 HPS5Q9UPZ3 1129 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 ATP6V1C1P21283 382 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 EPHB2P29323 1055 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 NOTUMQ6P988 496 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 DEFB128Q7Z7B8 93 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 CBWD2Q8IUF1 395 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 APOL2Q9BQE5 337 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 FHDC1Q9C0D6 1143 aaPredicted RBP13.1□□□□□ -0.31
SPG11-203ENST00000535302 RNF19AQ9NV58 838 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 UVRAGQ9P2Y5 699 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 IL18RAPO95256 599 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 CETPP11597 493 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 ACO1P21399 889 aaKnown RBP13.1□□□□□ -0.31
SPG11-203ENST00000535302 FBXO33Q7Z6M2 555 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 ECSITQ9BQ95 431 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 PPP1R3GB7ZBB8 358 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 CAPN15O75808 1086 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 MT-CO1P00395 513 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 LRG1P02750 347 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 FGFR1P11362 822 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 SERPINB3P29508 390 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 CDH18Q13634 790 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 BTN2A1Q7KYR7 527 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 ZNF786Q8N393 782 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 SH3GL2Q99962 352 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 PACSIN1Q9BY11 444 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 UTP6Q9NYH9 597 aaKnown RBP13.1□□□□□ -0.31
SPG11-203ENST00000535302 ALDH9A1P49189 494 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 NT5C2P49902 561 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 CPT1AP50416 773 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 MAPK10P53779 464 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 PLCL1Q15111 1095 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 TSGA10IPQ3SY00 556 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 FEZF2Q8TBJ5 459 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 ZFYVE1Q9HBF4 777 aa13.1□□□□□ -0.31
SPG11-203ENST00000535302 TSPAN3O60637 253 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 FAM200BP0CF97 657 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 GPC1P35052 558 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 RUNX1T1Q06455 604 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 TRIP10Q15642 601 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 TKFCQ3LXA3 575 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 LRRC8BQ6P9F7 803 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 MTA3Q9BTC8 594 aa13.09□□□□□ -0.31
SPG11-203ENST00000535302 NIF3L1Q9GZT8 377 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms