RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 JMJD4Q9H9V9 463 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 NGRNQ9NPE2 291 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 TOMM22Q9NS69 142 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 WHRNQ9P202 907 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 PUF60Q9UHX1 559 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 ST3GAL5Q9UNP4 418 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 GINS2Q9Y248 185 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 BACE2Q9Y5Z0 518 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 MICAL3Q7RTP6 2002 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 FOCADQ5VW36 1801 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 KALRNO60229 2985 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 CACNA1FO60840 1977 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 TENM4Q6N022 2769 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 COL4A3Q01955 1670 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 TRBV23OR9-2A0A075B6M9 112 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 TAF4O00268 1085 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 DDX3XO00571 662 aaKnown RBP eCLIP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 SCAMP3O14828 347 aaKnown RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 LAMTOR5O43504 91 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 TOP1P11387 765 aaKnown RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 RPL13P26373 211 aaKnown RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 METAP2P50579 478 aaKnown RBP eCLIP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 HAND2P61296 217 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 KRT17Q04695 432 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 PAK2Q13177 524 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 MRPL58Q14197 206 aaKnown RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 SMC1AQ14683 1233 aaKnown RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 UBXN2BQ14CS0 331 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 SURF1Q15526 300 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 PTPN14Q15678 1187 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 LETM2Q2VYF4 491 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ZKSCAN2Q63HK3 967 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ZSCAN25Q6NSZ9 544 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 UNQ6494/PRO21346Q6UXR6 183 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 STOX1Q6ZVD7 989 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 OTOP3Q7RTS5 596 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 TAS1R1Q7RTX1 841 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 SPRED1Q7Z699 444 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 GPR149Q86SP6 731 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 DCP2Q8IU60 420 aaKnown RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ERC1Q8IUD2 1116 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 VPS52Q8N1B4 723 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 SLC39A11Q8N1S5 342 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 KYQ8NBH2 561 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ZBTB44Q8NCP5 570 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 PJA1Q8NG27 643 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 APPBP2Q92624 585 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 KIF1BPQ96EK5 621 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 LCORQ96JN0 433 aaPredicted RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ZNF668Q96K58 619 aaPredicted RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ZNF558Q96NG5 402 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 PCYT2Q99447 389 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 GORASP1Q9BQQ3 440 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 YIPF4Q9BSR8 244 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 VN1R3Q9BXE9 311 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 C1QTNF3Q9BXJ4 246 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 CELF4Q9BZC1 486 aaKnown RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 NAPBQ9H115 298 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 EPC1Q9H2F5 836 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 DEF6Q9H4E7 631 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ATP6V0A4Q9HBG4 840 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ZNF287Q9HBT7 754 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 JADE2Q9NQC1 790 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ARHGEF3Q9NR81 526 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 METTL5Q9NRN9 209 aaKnown RBP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 RGS18Q9NS28 235 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 IGSF5Q9NSI5 407 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 SEMA4GQ9NTN9 838 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ZSCAN32Q9NX65 697 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 SPG21Q9NZD8 308 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 MARCH2Q9P0N8 246 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 PCDHA1Q9Y5I3 950 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 TRPV2Q9Y5S1 764 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 ASXL3Q9C0F0 2248 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 CELSR3Q9NYQ7 3312 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 WDR19Q8NEZ3 1342 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 NRCAMQ92823 1304 aa3.41□□□□□ -1.86
CHMP4A-208ENST00000534106 HECTD1Q9ULT8 2610 aa3.4□□□□□ -1.86
CHMP4A-208ENST00000534106 SDK1Q7Z5N4 2213 aa3.4□□□□□ -1.86
CHMP4A-208ENST00000534106 PLIN4Q96Q06 1357 aa3.4□□□□□ -1.86
CHMP4A-208ENST00000534106 MYO18BQ8IUG5 2567 aa3.4□□□□□ -1.86
CHMP4A-208ENST00000534106 CCDC195A0A1B0GUA6 201 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 DENND3A2RUS2 1198 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 MBLAC1A4D2B0 266 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 NPEPPSL1A6NEC2 478 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 SHISA7A6NL88 538 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 C1QTNF3-AMACRE9PGA6 284 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 OVOL3O00110 214 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 DHX16O60231 1041 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 B4GALT3O60512 393 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 CSDE1O75534 798 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 RFPL2O75678 378 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 KCNK5O95279 499 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 C8BP07358 591 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 SLC3A2P08195 630 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 CNPP09543 421 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 SNHG28P0DPA3 235 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 TGFB3P10600 412 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms