RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 FAM49BQ9NUQ9 324 aa29.93■■■□□ 2.38
SAMD1-202ENST00000533683 CD4P01730 458 aa29.93■■■□□ 2.38
SAMD1-202ENST00000533683 KCNE1P15382 129 aa29.93■■■□□ 2.38
SAMD1-202ENST00000533683 KLRC2P26717 231 aa29.93■■■□□ 2.38
SAMD1-202ENST00000533683 GNGT1P63211 74 aa29.93■■■□□ 2.38
SAMD1-202ENST00000533683 GSTA5Q7RTV2 222 aa29.93■■■□□ 2.38
SAMD1-202ENST00000533683 PIWIL1Q96J94 861 aaKnown RBP29.93■■■□□ 2.38
SAMD1-202ENST00000533683 TRAIPQ9BWF2 469 aa29.93■■■□□ 2.38
SAMD1-202ENST00000533683 IPPQ9Y573 584 aa29.93■■■□□ 2.38
SAMD1-202ENST00000533683 TULP2O00295 520 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 RIPK2O43353 540 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 LMNB2Q03252 620 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 ACAP1Q15027 740 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 FBXO47Q5MNV8 452 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 OR6B2Q6IFH4 312 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 PMF1Q6P1K2 205 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 PRUNE1Q86TP1 453 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 OR6B3Q8NGW1 331 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 PCSK1NQ9UHG2 260 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 ANAPC5Q9UJX4 755 aa29.92■■■□□ 2.38
SAMD1-202ENST00000533683 MIPP30301 263 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 CHKAP35790 457 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 RGS7P49802 495 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 ZNF143P52747 638 aaPredicted RBP29.91■■■□□ 2.38
SAMD1-202ENST00000533683 CAV1Q03135 178 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 TRNP1Q6NT89 227 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 UNC93AQ86WB7 457 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 SMG8Q8ND04 991 aaKnown RBP29.91■■■□□ 2.38
SAMD1-202ENST00000533683 MIS12Q9H081 205 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 GRIN2DO15399 1336 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 RNF8O76064 485 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 HPDP32754 393 aaPredicted RBP29.91■■■□□ 2.38
SAMD1-202ENST00000533683 HNRNPH2P55795 449 aaKnown RBP29.91■■■□□ 2.38
SAMD1-202ENST00000533683 SREBF2Q12772 1141 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 GNASQ5JWF2 1037 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 ARRDC4Q8NCT1 418 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 HAUS1Q96CS2 278 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 NOVA2Q9UNW9 492 aaKnown RBP29.91■■■□□ 2.38
SAMD1-202ENST00000533683 ZNF148Q9UQR1 794 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 EFR3BQ9Y2G0 817 aa29.91■■■□□ 2.38
SAMD1-202ENST00000533683 SPTLC1O15269 473 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 KDELR1P24390 212 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 SOX4Q06945 474 aaPredicted RBP29.9■■■□□ 2.38
SAMD1-202ENST00000533683 TAF2Q6P1X5 1199 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 SESTD1Q86VW0 696 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 ZIC5Q96T25 663 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 LPIN3Q9BQK8 851 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 DPEP3Q9H4B8 488 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 ASNSD1Q9NWL6 643 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 C2CD4BA6NLJ0 364 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 KPNA7A9QM74 516 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 HCRTO43612 131 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 TAZQ16635 292 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 SKIDA1Q1XH10 827 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 HOOK3Q86VS8 718 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 FAM228AQ86W67 206 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 GLIS1Q8NBF1 620 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 KBTBD7Q8WVZ9 684 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 ARHGAP39Q9C0H5 1083 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 GOLGA2P5Q9HBQ8 144 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 USP18Q9UMW8 372 aa29.9■■■□□ 2.38
SAMD1-202ENST00000533683 DRG1Q9Y295 367 aaKnown RBP29.9■■■□□ 2.38
SAMD1-202ENST00000533683 A6NNZ2 444 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 A8MXQ7 604 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 CAND2O75155 1236 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 GPD1P21695 349 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 TAF5Q15542 800 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 OASLQ15646 514 aaKnown RBP29.89■■■□□ 2.38
SAMD1-202ENST00000533683 TUBB8Q3ZCM7 444 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 SH3PXD2AQ5TCZ1 1133 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 TRMT10CQ7L0Y3 403 aaKnown RBP29.89■■■□□ 2.38
SAMD1-202ENST00000533683 UHMK1Q8TAS1 419 aaKnown RBP29.89■■■□□ 2.38
SAMD1-202ENST00000533683 SLC35F5Q8WV83 523 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 RXFP2Q8WXD0 754 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 TSPAN18Q96SJ8 248 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 CNPY3Q9BT09 278 aa29.89■■■□□ 2.38
SAMD1-202ENST00000533683 CDC42EP4Q9H3Q1 356 aaKnown RBP29.89■■■□□ 2.38
SAMD1-202ENST00000533683 DCDC2CA8MYV0 355 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 EIF3HO15372 352 aaKnown RBP eCLIP29.88■■■□□ 2.37
SAMD1-202ENST00000533683 XPOTO43592 962 aaKnown RBP29.88■■■□□ 2.37
SAMD1-202ENST00000533683 TRUB2O95900 331 aaKnown RBP29.88■■■□□ 2.37
SAMD1-202ENST00000533683 CD48P09326 243 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 CYBAP13498 195 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 VCPP55072 806 aaKnown RBP29.88■■■□□ 2.37
SAMD1-202ENST00000533683 GJA9P57773 515 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 ALLCQ8N6M5 410 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 CMASQ8NFW8 434 aaPredicted RBP29.88■■■□□ 2.37
SAMD1-202ENST00000533683 NKD2Q969F2 451 aaPredicted RBP29.88■■■□□ 2.37
SAMD1-202ENST00000533683 MTG1Q9BT17 334 aaPredicted RBP29.88■■■□□ 2.37
SAMD1-202ENST00000533683 SLC4A5Q9BY07 1137 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 GDAP2Q9NXN4 497 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 TLL2Q9Y6L7 1015 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 KPNA6O60684 536 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 GRAP2O75791 330 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 FGFR1P11362 822 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 PDGFRAP16234 1089 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 PCK1P35558 622 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 IZUMO3Q5VZ72 239 aa29.88■■■□□ 2.37
SAMD1-202ENST00000533683 TWF2Q6IBS0 349 aaKnown RBP29.88■■■□□ 2.37
SAMD1-202ENST00000533683 BBOF1Q8ND07 529 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms