RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 BCCIPQ9P287 314 aaKnown RBP eCLIP12.4□□□□□ -0.42
CMTM1-216ENST00000533078 AGAP1Q9UPQ3 857 aa12.4□□□□□ -0.42
CMTM1-216ENST00000533078 INVSQ9Y283 1065 aa12.4□□□□□ -0.42
CMTM1-216ENST00000533078 OBSL1O75147 1896 aa12.4□□□□□ -0.42
CMTM1-216ENST00000533078 ANKRD63C9JTQ0 380 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 SLC9A3R1O14745 358 aaPredicted RBP12.39□□□□□ -0.43
CMTM1-216ENST00000533078 GIPC1O14908 333 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 ITGB3P05106 788 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 KRT19P08727 400 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 PFKLP17858 780 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 PLCG1P19174 1290 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 LONP1P36776 959 aaKnown RBP12.39□□□□□ -0.43
CMTM1-216ENST00000533078 MRPS21P82921 87 aaKnown RBP12.39□□□□□ -0.43
CMTM1-216ENST00000533078 MYO1EQ12965 1108 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 MAPRE1Q15691 268 aaKnown RBP12.39□□□□□ -0.43
CMTM1-216ENST00000533078 CFAP221Q4G0U5 840 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 ZC2HC1CQ53FD0 456 aaPredicted RBP12.39□□□□□ -0.43
CMTM1-216ENST00000533078 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 ARL14EPQ8N8R7 260 aaPredicted RBP12.39□□□□□ -0.43
CMTM1-216ENST00000533078 STKLD1Q8NE28 680 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 USP33Q8TEY7 942 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 CYP2S1Q96SQ9 504 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 ST6GALNAC4Q9H4F1 302 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 TMLHEQ9NVH6 421 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 TRPM5Q9NZQ8 1165 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 SEL1LQ9UBV2 794 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 RALYQ9UKM9 306 aaKnown RBP12.39□□□□□ -0.43
CMTM1-216ENST00000533078 GTF3C4Q9UKN8 822 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 MMP17Q9ULZ9 603 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 L1RE1Q9UN81 338 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 ARHGAP26Q9UNA1 814 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 STYXL1Q9Y6J8 313 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 BAHCC1Q9P281 2608 aa12.39□□□□□ -0.43
CMTM1-216ENST00000533078 ABCA7Q8IZY2 2146 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 TADA3O75528 432 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 TCF3P15923 654 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 ACAT1P24752 427 aaKnown RBP12.38□□□□□ -0.43
CMTM1-216ENST00000533078 RBP5P82980 135 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 HSF5Q4G112 596 aaPredicted RBP12.38□□□□□ -0.43
CMTM1-216ENST00000533078 PREPLQ4J6C6 727 aaPredicted RBP12.38□□□□□ -0.43
CMTM1-216ENST00000533078 TRIM61Q5EBN2 209 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 NAIF1Q69YI7 327 aaPredicted RBP12.38□□□□□ -0.43
CMTM1-216ENST00000533078 RASSF3Q86WH2 238 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 SYCP3Q8IZU3 236 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 HDDC3Q8N4P3 179 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 CSGALNACT2Q8N6G5 542 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 TOP6BLQ8N6T0 577 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 RIN3Q8TB24 985 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 NOC3LQ8WTT2 800 aaKnown RBP12.38□□□□□ -0.43
CMTM1-216ENST00000533078 CEP295NLQ96MC4 621 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 ACCSQ96QU6 501 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 FAM213AQ9BRX8 229 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 MRPL44Q9H9J2 332 aaKnown RBP12.38□□□□□ -0.43
CMTM1-216ENST00000533078 RBAKQ9NYW8 714 aaPredicted RBP12.38□□□□□ -0.43
CMTM1-216ENST00000533078 MAGEC2Q9UBF1 373 aaPredicted RBP12.38□□□□□ -0.43
CMTM1-216ENST00000533078 EVLQ9UI08 416 aaPredicted RBP12.38□□□□□ -0.43
CMTM1-216ENST00000533078 SNX9Q9Y5X1 595 aa12.38□□□□□ -0.43
CMTM1-216ENST00000533078 IGF2RP11717 2491 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.37□□□□□ -0.43
CMTM1-216ENST00000533078 TISP43B9A030 160 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 ZBTB24O43167 697 aaPredicted RBP12.37□□□□□ -0.43
CMTM1-216ENST00000533078 APODP05090 189 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 GAP43P17677 238 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 GRIK1P39086 918 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 TXLNAP40222 546 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 MAGEA11P43364 429 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 MAPK8P45983 427 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 PPP3CCP48454 512 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 CRY1Q16526 586 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 EOGTQ5NDL2 527 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 VSTM1Q6UX27 236 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 DENND5BQ6ZUT9 1274 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 ZNF720Q7Z2F6 126 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 SYT12Q8IV01 421 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 BRSK2Q8IWQ3 736 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 PGBD3Q8N328 593 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 CCDC33Q8N5R6 958 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 KIAA1958Q8N8K9 716 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 DEFB124Q8NES8 71 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 MDGA1Q8NFP4 955 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 ZCCHC14Q8WYQ9 949 aaKnown RBP12.37□□□□□ -0.43
CMTM1-216ENST00000533078 ANKRD36BP1Q96IX9 119 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 SCNM1Q9BWG6 230 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 BLOC1S4Q9NUP1 217 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 GDAP2Q9NXN4 497 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 CCDC39Q9UFE4 941 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
CMTM1-216ENST00000533078 MYO16Q9Y6X6 1858 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 LAMA5O15230 3695 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 C2orf78A6NCI8 922 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 PATE3B3GLJ2 98 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 H0Y626 953 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 TNFRSF10BO14763 440 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 TRIM66O15016 1216 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 TRIM16O95361 564 aa12.36□□□□□ -0.43
CMTM1-216ENST00000533078 GCNT3O95395 438 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms