RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 TNNC2P02585 160 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 CKMP06732 381 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 GJA4P35212 333 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 GALK1P51570 392 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 MYO1EQ12965 1108 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 PDGFRLQ15198 375 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 CSRP2Q16527 193 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 ARL14EPQ8N8R7 260 aaPredicted RBP18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 DHX58Q96C10 678 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 ECT2Q9H8V3 914 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 DUS2Q9NX74 493 aaKnown RBP18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 GCNT4Q9P109 453 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 TFIP11Q9UBB9 837 aaKnown RBP18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 R3HCC1Q9Y3T6 440 aaKnown RBP18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 NME7Q9Y5B8 376 aa18.29■□□□□ 0.52
RPUSD4-207ENST00000532800 SPTLC2O15270 562 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 USP17L7P0C7H9 530 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 BDNFP23560 247 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 MAGEA11P43364 429 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 ASIC1P78348 528 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 CCDC6Q16204 474 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 DUOXA2Q1HG44 320 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 C4orf50Q6ZRC1 276 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 STXBP4Q6ZWJ1 553 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 EPM2AIP1Q7L775 607 aaPredicted RBP18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 DPH6Q7L8W6 267 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 CPA6Q8N4T0 437 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 RDH13Q8NBN7 331 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 NETO1Q8TDF5 533 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 OSCP1Q8WVF1 389 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 GAB3Q8WWW8 586 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 EZH1Q92800 747 aaPredicted RBP18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 P2RY13Q9BPV8 354 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 MAGEC2Q9UBF1 373 aaPredicted RBP18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 CDH9Q9ULB4 789 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 SLC8A2Q9UPR5 921 aa18.28■□□□□ 0.52
RPUSD4-207ENST00000532800 K7ELQ4 463 aaPredicted RBP18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 SLC30A4O14863 429 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 AXIN1O15169 862 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 EIF3DO15371 548 aaKnown RBP eCLIP18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 TGFB1I1O43294 461 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 RPP40O75818 363 aaKnown RBP18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 PDGFRBP09619 1106 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 WARSP23381 471 aaKnown RBP18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 IFNAR2P48551 515 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 USP46P62068 366 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 SURF1Q15526 300 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 EML3Q32P44 896 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 SHC4Q6S5L8 630 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 TRAPPC11Q7Z392 1133 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 KBTBD6Q86V97 674 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 WDR49Q8IV35 697 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 SH3RF2Q8TEC5 729 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 HHIPQ96QV1 700 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 MMS19Q96T76 1030 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 MRPL45Q9BRJ2 306 aaKnown RBP18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 AGPAT3Q9NRZ7 376 aa18.27■□□□□ 0.52
RPUSD4-207ENST00000532800 CLIC2O15247 247 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 ATG13O75143 517 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 PPP6R2O75170 966 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 CST3P01034 146 aaPredicted RBP18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 DLATP10515 647 aaKnown RBP18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 DRD1P21728 446 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 CASP1P29466 404 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 ZXDBP98169 803 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 AMPD2Q01433 879 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 CYP27A1Q02318 531 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 KCNB1Q14721 858 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 SNRNP35Q16560 246 aaKnown RBP18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 FAM26FQ5R3K3 315 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 FOXD4L5Q5VV16 416 aaPredicted RBP18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 NELFCDQ8IXH7 590 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 FSIP1Q8NA03 581 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 RPLP0P6Q8NHW5 317 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 ZNF507Q8TCN5 953 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 FOXD4L4Q8WXT5 416 aaPredicted RBP18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 ATP2A3Q93084 1043 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 PCED1BQ96HM7 432 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 SPATA17Q96L03 361 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 CNTNAP3BQ96NU0 1288 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 CNTNAP3Q9BZ76 1288 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 LRRC27Q9C0I9 530 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 ARRDC1-AS1Q9H2J1 176 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 CUEDC2Q9H467 287 aa18.26■□□□□ 0.51
RPUSD4-207ENST00000532800 CCDC192P0DO97 292 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 HDCP19113 662 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 GRIK1P39086 918 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 CYP2J2P51589 502 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 SF3A2Q15428 464 aaKnown RBP18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 MDH1BQ5I0G3 518 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 VSTM1Q6UX27 236 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 SCFD1Q8WVM8 642 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 CD101Q93033 1021 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 CGRRF1Q99675 332 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 LINC00597Q9H2U6 94 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 KIAA1586Q9HCI6 787 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 ARHGAP26Q9UNA1 814 aa18.25■□□□□ 0.51
RPUSD4-207ENST00000532800 TPRP12270 2363 aaKnown RBP18.24■□□□□ 0.51
RPUSD4-207ENST00000532800 CCDC163A0A0D9SF12 145 aa18.24■□□□□ 0.51
RPUSD4-207ENST00000532800 YEATS4O95619 227 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms