RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 SPATA2LQ8IUW3 424 aaPredicted RBP16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 LINC00301Q8NCQ3 95 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 USP13Q92995 863 aaPredicted RBP16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 FUBP3Q96I24 572 aaKnown RBP eCLIP16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 FAM84AQ96KN4 292 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 PKMYT1Q99640 499 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 CUEDC2Q9H467 287 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 GKN1Q9NS71 199 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 SIX4Q9UIU6 781 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 CDV3Q9UKY7 258 aaKnown RBP16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 CCL26Q9Y258 94 aa16.3■□□□□ 0.2
DEPDC7-204ENST00000532078 ZNF638Q14966 1978 aaKnown RBP16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 MED19A0JLT2 244 aaPredicted RBP16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 ZNF233A6NK53 670 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 K7ELQ4 463 aaPredicted RBP16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 SPTLC2O15270 562 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 LRP3O75074 770 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 NOL4O94818 638 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 RETP07949 1114 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 CYP2F1P24903 491 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 HOXA6P31267 233 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 AMPD2Q01433 879 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 RUNX3Q13761 415 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 SIM2Q14190 667 aaPredicted RBP16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 DDR2Q16832 855 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 SDHAF4Q5VUM1 108 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 CC2D1AQ6P1N0 951 aaPredicted RBP16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 DPH6Q7L8W6 267 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 OSTM1Q86WC4 334 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 STKLD1Q8NE28 680 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 MYRFLQ96LU7 910 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 ZNF396Q96N95 335 aaPredicted RBP16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 FAM83CQ9BQN1 747 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 KIAA1586Q9HCI6 787 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 INTS13Q9NVM9 706 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 GTF3C4Q9UKN8 822 aa16.29■□□□□ 0.2
DEPDC7-204ENST00000532078 GABRDO14764 452 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 EIF3DO15371 548 aaKnown RBP eCLIP16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 PPP6R2O75170 966 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 TADA3O75528 432 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 ASIC1P78348 528 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 AMPD3Q01432 767 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 DMWDQ09019 674 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 GRSF1Q12849 480 aaKnown RBP eCLIP16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 PDGFRLQ15198 375 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 DUOXA2Q1HG44 320 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 SOWAHAQ2M3V2 549 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 LMBRD2Q68DH5 695 aaPredicted RBP16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 HEATR6Q6AI08 1181 aaKnown RBP16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 C4orf50Q6ZRC1 276 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 HPDLQ96IR7 371 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 TRIM9Q9C026 710 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 EBF3Q9H4W6 596 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 PARD6AQ9NPB6 346 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 HPS4Q9NQG7 708 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 KBTBD4Q9NVX7 518 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 HSPBP1Q9NZL4 362 aa16.28■□□□□ 0.2
DEPDC7-204ENST00000532078 PTPRJQ12913 1337 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 TRAV19A0A0A6YYK7 116 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 CKMP06732 381 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 TGM1P22735 817 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 MAGEA11P43364 429 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 SPEM2Q0P670 501 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 MAPRE1Q15691 268 aaKnown RBP16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 CCDC142Q17RM4 750 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 TMEM196Q5HYL7 178 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 TRIM68Q6AZZ1 485 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 WDR5BQ86VZ2 330 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 CBWD2Q8IUF1 395 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 WDR49Q8IV35 697 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 SCN4BQ8IWT1 228 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 FSIP1Q8NA03 581 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 GLIS3Q8NEA6 775 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 OR5B17Q8NGF7 314 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 EXOC4Q96A65 974 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 DHX58Q96C10 678 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 SYT15Q9BQS2 421 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 TRPC7Q9HCX4 862 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 TSR3Q9UJK0 312 aaKnown RBP16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 CDH9Q9ULB4 789 aa16.27■□□□□ 0.2
DEPDC7-204ENST00000532078 UBE4BO95155 1302 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 TRDMT1O14717 391 aaKnown RBP16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 HCRTO43612 131 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 CUTAO60888 179 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 ATG13O75143 517 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 YEATS4O95619 227 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 USP17L7P0C7H9 530 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 USP4Q13107 963 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 MTF1Q14872 753 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 FAM26FQ5R3K3 315 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 SCARA3Q6AZY7 606 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 FSTL4Q6MZW2 842 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 CNNM4Q6P4Q7 775 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 FAM171BQ6P995 826 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 CEP68Q76N32 757 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 LIMS2Q7Z4I7 341 aa16.26■□□□□ 0.19
DEPDC7-204ENST00000532078 CPA6Q8N4T0 437 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms