RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 DLX2Q07687 328 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 DRAP1Q14919 205 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 ARHGAP17Q68EM7 881 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 SYCE2Q6PIF2 218 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 SARM1Q6SZW1 724 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 FUKQ8N0W3 1084 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 C12orf76Q8N812 135 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 C12orf29Q8N999 325 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 C8orf48Q96LL4 319 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 GCNAQ96QF7 691 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 APOL5Q9BWW9 433 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 COL25A1Q9BXS0 654 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 ZNF518BQ9C0D4 1074 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 XPO4Q9C0E2 1151 aaKnown RBP12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 GANQ9H2C0 597 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 ASAH2Q9NR71 780 aa12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 UXTQ9UBK9 157 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-220ENST00000532024 ZNF197O14709 1029 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 THAP12O43422 761 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 PAPLNO95428 1278 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 VNN2O95498 520 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 SETSIPP0DME0 302 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 NPR3P17342 541 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 STAT1P42224 750 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 KLK7P49862 253 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 PDE6CP51160 858 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 BCAT1P54687 386 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 TRIM14Q14142 442 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 MEA1Q16626 185 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 CCDC142Q17RM4 750 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 PABPC1LQ4VXU2 614 aaKnown RBP12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 FIGNQ5HY92 759 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 CYP4A22Q5TCH4 519 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 FAM71AQ8IYT1 594 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 TTC9BQ8N6N2 239 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 PSMG2Q969U7 264 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 SPATA17Q96L03 361 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 NAA15Q9BXJ9 866 aaKnown RBP12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 EDEM3Q9BZQ6 932 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 TRIM5Q9C035 493 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 NUCKS1Q9H1E3 243 aaKnown RBP12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 RBSNQ9H1K0 784 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 CRISPLD1Q9H336 500 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 NLRC4Q9NPP4 1024 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 MYO6Q9UM54 1294 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 USP15Q9Y4E8 981 aaPredicted RBP12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 CEP83Q9Y592 693 aa12.54□□□□□ -0.4
PPFIA1-220ENST00000532024 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.54□□□□□ -0.48e-9■□□□□ 10.6
PPFIA1-220ENST00000532024 VCANP13611 3396 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 F8VP50 259 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 O00370 1275 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 FOXN3O00409 490 aaPredicted RBP12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 CLDN5O00501 218 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 NOL4O94818 638 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 RTN3O95197 1032 aaPredicted RBP12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 ATF6P18850 670 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 KRT9P35527 623 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 CDR1P51861 262 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 MRPS5P82675 430 aaKnown RBP12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 BST2Q10589 180 aaKnown RBP12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 CNGA2Q16280 664 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 DDR2Q16832 855 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 GOLGA7BQ2TAP0 167 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 PPP1R26Q5T8A7 1209 aaPredicted RBP12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 PTCRAQ6ISU1 281 aaPredicted RBP12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 LCLAT1Q6UWP7 414 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 PDZD4Q76G19 769 aaPredicted RBP12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 ANKRD52Q8NB46 1076 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 ZNF707Q96C28 371 aaPredicted RBP12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 LPIN3Q9BQK8 851 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 CORO1BQ9BR76 489 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 DUSP16Q9BY84 665 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 S1PR5Q9H228 398 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 PDCL3Q9H2J4 239 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 TSPAN16Q9UKR8 245 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 CLUHO75153 1309 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 ITIH6Q6UXX5 1313 aa12.53□□□□□ -0.4
PPFIA1-220ENST00000532024 A0A1W2PQJ5 194 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 SLC38A8A6NNN8 435 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 M0QYV0 167 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 CYP26A1O43174 497 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 MBTPS2O43462 519 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 SOAT2O75908 522 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 FERP16591 822 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 BRD2P25440 801 aaKnown RBP12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 CDC25CP30307 473 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 SOX5P35711 763 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 MAP3K7CLP57077 242 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 SPECC1LQ69YQ0 1117 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 DPY19L2P1Q6NXN4 242 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 GRASPQ7Z6J2 395 aaPredicted RBP12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 DNAJB7Q7Z6W7 309 aaPredicted RBP12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 GAS2L3Q86XJ1 694 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 ZNF677Q86XU0 584 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 NUP93Q8N1F7 819 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms