RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 TOP6BLQ8N6T0 577 aa22.53■■□□□ 1.2
FDFT1-220ENST00000531733 C12orf50Q8NA57 414 aaPredicted RBP22.53■■□□□ 1.2
FDFT1-220ENST00000531733 OR5B17Q8NGF7 314 aa22.53■■□□□ 1.2
FDFT1-220ENST00000531733 CACTINQ8WUQ7 758 aaKnown RBP22.53■■□□□ 1.2
FDFT1-220ENST00000531733 KBTBD7Q8WVZ9 684 aa22.53■■□□□ 1.2
FDFT1-220ENST00000531733 ZC3H10Q96K80 434 aaKnown RBP22.53■■□□□ 1.2
FDFT1-220ENST00000531733 DUSP15Q9H1R2 295 aaPredicted RBP22.53■■□□□ 1.2
FDFT1-220ENST00000531733 OLFML3Q9NRN5 406 aa22.53■■□□□ 1.2
FDFT1-220ENST00000531733 CKMP06732 381 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 PSMC1P62191 440 aaKnown RBP22.52■■□□□ 1.2
FDFT1-220ENST00000531733 RBP5P82980 135 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 ST3GAL2Q16842 350 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 IL31Q6EBC2 164 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 FAM171BQ6P995 826 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 LIMS2Q7Z4I7 341 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 SPATA2LQ8IUW3 424 aaPredicted RBP22.52■■□□□ 1.2
FDFT1-220ENST00000531733 SYCP3Q8IZU3 236 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 CPA6Q8N4T0 437 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 CAMKK1Q8N5S9 505 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 SH3RF2Q8TEC5 729 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 CD101Q93033 1021 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 HPS3Q969F9 1004 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 CRTAC1Q9NQ79 661 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 UXTQ9UBK9 157 aaPredicted RBP22.52■■□□□ 1.2
FDFT1-220ENST00000531733 PCDHB13Q9Y5F0 798 aa22.52■■□□□ 1.2
FDFT1-220ENST00000531733 TRAV19A0A0A6YYK7 116 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 FOXD2O60548 495 aaPredicted RBP22.51■■□□□ 1.19
FDFT1-220ENST00000531733 AKAP3O75969 853 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 LDHAP00338 332 aaKnown RBP22.51■■□□□ 1.19
FDFT1-220ENST00000531733 USP17L7P0C7H9 530 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 MPLP40238 635 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 USP46P62068 366 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 CUL4AQ13619 759 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 STPG1Q5TH74 334 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 TMEM206Q9H813 350 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 PANK4Q9NVE7 773 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 INVSQ9Y283 1065 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 NME7Q9Y5B8 376 aa22.51■■□□□ 1.19
FDFT1-220ENST00000531733 HELZP42694 1942 aaKnown RBP22.51■■□□□ 1.19
FDFT1-220ENST00000531733 TMEM191BP0C7N4 346 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 IFNAR2P48551 515 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 LHX1P48742 406 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 AMPD2Q01433 879 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 DMC1Q14565 340 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 GAB4Q2WGN9 574 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 SYT13Q7L8C5 426 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 CBWD2Q8IUF1 395 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 MYLPFQ96A32 169 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 SYT15Q9BQS2 421 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 INTS13Q9NVM9 706 aa22.5■■□□□ 1.19
FDFT1-220ENST00000531733 PTPRDP23468 1912 aa22.49■■□□□ 1.19
FDFT1-220ENST00000531733 BDNFP23560 247 aa22.49■■□□□ 1.19
FDFT1-220ENST00000531733 PMLP29590 882 aa22.49■■□□□ 1.19
FDFT1-220ENST00000531733 HOXD13P35453 343 aa22.49■■□□□ 1.19
FDFT1-220ENST00000531733 PSMD2Q13200 908 aa22.49■■□□□ 1.19
FDFT1-220ENST00000531733 FBXO43Q4G163 708 aa22.49■■□□□ 1.19
FDFT1-220ENST00000531733 GPD1LQ8N335 351 aa22.49■■□□□ 1.19
FDFT1-220ENST00000531733 ATP2A3Q93084 1043 aa22.49■■□□□ 1.19
FDFT1-220ENST00000531733 FUBP3Q96I24 572 aaKnown RBP eCLIP22.49■■□□□ 1.19
FDFT1-220ENST00000531733 PCDHGA5Q9Y5G8 931 aa22.49■■□□□ 1.19
FDFT1-220ENST00000531733 PDGFRBP09619 1106 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 HDCP19113 662 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 PCSK1P29120 753 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 OPRD1P41143 372 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 STAT6P42226 847 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 MAGEA11P43364 429 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 SEC13P55735 322 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 SFTPA1Q8IWL2 248 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 SPATA18Q8TC71 538 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 DDX1Q92499 740 aaKnown RBP22.48■■□□□ 1.19
FDFT1-220ENST00000531733 HPDLQ96IR7 371 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 USP28Q96RU2 1077 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 ARHGAP26Q9UNA1 814 aa22.48■■□□□ 1.19
FDFT1-220ENST00000531733 K7EQS6 105 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 APBB3O95704 486 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 SYT1P21579 422 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 TXLNAP40222 546 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 KCNB1Q14721 858 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 CCDC73Q6ZRK6 1079 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 ABCA7Q8IZY2 2146 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 PDILTQ8N807 584 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 ANKRD36BP1Q96IX9 119 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 CHAMP1Q96JM3 812 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 TPSD1Q9BZJ3 242 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 VPS45Q9NRW7 570 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 TMEM30AQ9NV96 361 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 MAGEC2Q9UBF1 373 aaPredicted RBP22.47■■□□□ 1.19
FDFT1-220ENST00000531733 EBF1Q9UH73 591 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 CDH9Q9ULB4 789 aa22.47■■□□□ 1.19
FDFT1-220ENST00000531733 SCAMP3O14828 347 aaKnown RBP22.46■■□□□ 1.19
FDFT1-220ENST00000531733 TCF3P15923 654 aa22.46■■□□□ 1.19
FDFT1-220ENST00000531733 DGKEP52429 567 aa22.46■■□□□ 1.19
FDFT1-220ENST00000531733 CACNA2D1P54289 1103 aa22.46■■□□□ 1.19
FDFT1-220ENST00000531733 CREB5Q02930 508 aa22.46■■□□□ 1.19
FDFT1-220ENST00000531733 MESP2Q0VG99 397 aa22.46■■□□□ 1.19
FDFT1-220ENST00000531733 ALCAMQ13740 583 aa22.46■■□□□ 1.19
FDFT1-220ENST00000531733 USP33Q8TEY7 942 aa22.46■■□□□ 1.19
FDFT1-220ENST00000531733 SPATA17Q96L03 361 aa22.46■■□□□ 1.19
FDFT1-220ENST00000531733 MRPL45Q9BRJ2 306 aaKnown RBP22.46■■□□□ 1.19
FDFT1-220ENST00000531733 LSM14BQ9BX40 385 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms