RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 KRT38O76015 456 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 MCL1Q07820 350 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 CHI3L2Q15782 390 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 KBTBD12Q3ZCT8 623 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 NDUFAF2Q8N183 169 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 RFWD2Q8NHY2 731 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 CLEC4DQ8WXI8 215 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 IFT122Q9HBG6 1241 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 CYP39A1Q9NYL5 469 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 AKT3Q9Y243 479 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 ACTL7BQ9Y614 415 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 SCN7AQ01118 1682 aa11.86□□□□□ -0.51
NXF1-211ENST00000531709 KBTBD13C9JR72 458 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 ASMTLO95671 621 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 KPNB1Q14974 876 aaKnown RBP11.85□□□□□ -0.51
NXF1-211ENST00000531709 SNX30Q5VWJ9 437 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 ANKRD22Q5VYY1 191 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 STYK1Q6J9G0 422 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 VSIG10LQ86VR7 867 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 SESTD1Q86VW0 696 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 SLC25A41Q8N5S1 370 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 ALKBH8Q96BT7 664 aaKnown RBP11.85□□□□□ -0.51
NXF1-211ENST00000531709 VCPIP1Q96JH7 1222 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 NKX1-2Q9UD57 310 aaPredicted RBP11.85□□□□□ -0.51
NXF1-211ENST00000531709 VWA5AO00534 786 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 RPL22P35268 128 aaKnown RBP11.85□□□□□ -0.51
NXF1-211ENST00000531709 TAP1Q03518 808 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 NPNTQ6UXI9 565 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 GADL1Q6ZQY3 521 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 TEX13BQ9BXU2 312 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 MYOZ2Q9NPC6 264 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 ZNRF3Q9ULT6 936 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 POLIQ9UNA4 740 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 MTO1Q9Y2Z2 717 aaKnown RBP11.85□□□□□ -0.51
NXF1-211ENST00000531709 LOC100653049A0A140TA62 436 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 FAM237BA0A1B0GVD1 139 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 CLGNO14967 610 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 MAFGO15525 162 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 KRT34O76011 436 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 ZCCHC18P0CG32 403 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 PTGER2P43116 358 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 SAMD3Q8N6K7 520 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 TSNARE1Q96NA8 513 aa11.85□□□□□ -0.51
NXF1-211ENST00000531709 PIH1D1Q9NWS0 290 aaKnown RBP11.85□□□□□ -0.51
NXF1-211ENST00000531709 DDX60LQ5H9U9 1706 aaKnown RBP11.85□□□□□ -0.51
NXF1-211ENST00000531709 LAMB1P07942 1786 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 ALOX15BO15296 676 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 SUPT20HL2P0C7V6 817 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 IVDP26440 423 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 SESN2P58004 480 aaPredicted RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 SUPT20HL1Q3ZLR7 823 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
NXF1-211ENST00000531709 PRPF39Q86UA1 669 aaKnown RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 WDR75Q8IWA0 830 aaKnown RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 UNC45BQ8IWX7 931 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 TRIM42Q8IWZ5 723 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 SLC26A7Q8TE54 656 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 MPHOSPH6Q99547 160 aaKnown RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 hCG_1818297A0A087WSY0 165 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 TMEM191CA6NGB0 347 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 NPM3O75607 178 aaKnown RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 LYPLA2O95372 231 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 KCNA3P22001 575 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 VHLP40337 213 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 RASA2Q15283 850 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 FNBP1LQ5T0N5 605 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 TRIM50Q86XT4 487 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 E2F7Q96AV8 911 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 PPP1R36Q96LQ0 422 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 DEFB129Q9H1M3 183 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 DHX35Q9H5Z1 703 aaKnown RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 DENND2DQ9H6A0 471 aaPredicted RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 XPNPEP1Q9NQW7 623 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 TELO2Q9Y4R8 837 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 KRT36O76013 467 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 C4BPAP04003 597 aaKnown RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 OSBPP22059 807 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 MMP8P22894 467 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 NAMPTP43490 491 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 CNTN2Q02246 1040 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 NBPF12Q5TAG4 269 aaPredicted RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 PLEKHA7Q6IQ23 1121 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 DENND1BQ6P3S1 775 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 RHBDF2Q6PJF5 856 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 ZCCHC23Q6ZST2 131 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 JOSD2Q8TAC2 188 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 SREK1Q8WXA9 508 aaKnown RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 ZNF570Q96NI8 536 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 VPS11Q9H270 941 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 LGALS13Q9UHV8 139 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 ANGPTL2Q9UKU9 493 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 USP18Q9UMW8 372 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 PHLPP1O60346 1717 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 SNRPAP09012 282 aaKnown RBP11.84□□□□□ -0.51
NXF1-211ENST00000531709 GDF10P55107 478 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 NXNQ6DKJ4 435 aa11.84□□□□□ -0.51
NXF1-211ENST00000531709 RGS9BPQ6ZS82 235 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms