RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 PRR23BQ6ZRT6 265 aa19.16■□□□□ 0.66
PTPN11-204ENST00000531326 TMEM150AQ86TG1 271 aa19.16■□□□□ 0.66
PTPN11-204ENST00000531326 ZC3H3Q8IXZ2 948 aaKnown RBP19.16■□□□□ 0.66
PTPN11-204ENST00000531326 THEM5Q8N1Q8 247 aa19.16■□□□□ 0.66
PTPN11-204ENST00000531326 SPPL2BQ8TCT7 592 aa19.16■□□□□ 0.66
PTPN11-204ENST00000531326 NELFBQ8WX92 580 aa19.16■□□□□ 0.66
PTPN11-204ENST00000531326 TMLHEQ9NVH6 421 aa19.16■□□□□ 0.66
PTPN11-204ENST00000531326 RAB23Q9ULC3 237 aa19.16■□□□□ 0.66
PTPN11-204ENST00000531326 CTNND2Q9UQB3 1225 aa19.16■□□□□ 0.66
PTPN11-204ENST00000531326 SPTBN2O15020 2390 aa19.16■□□□□ 0.66
PTPN11-204ENST00000531326 ZNF233A6NK53 670 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 KPNA7A9QM74 516 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 IL18RAPO95256 599 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 SDHBP21912 280 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 NR2F2P24468 414 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 CASP4P49662 377 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 LRRC63Q05C16 580 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 DGKKQ5KSL6 1271 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 SCARA3Q6AZY7 606 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 TTI2Q6NXR4 508 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 MLKLQ8NB16 471 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 RDH13Q8NBN7 331 aa19.15■□□□□ 0.66
PTPN11-204ENST00000531326 C2orf15Q8WU43 125 aaKnown RBP19.15■□□□□ 0.66
PTPN11-204ENST00000531326 ABI2Q9NYB9 513 aaPredicted RBP19.15■□□□□ 0.66
PTPN11-204ENST00000531326 CDV3Q9UKY7 258 aaKnown RBP19.15■□□□□ 0.66
PTPN11-204ENST00000531326 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.15■□□□□ 0.66
PTPN11-204ENST00000531326 RETP07949 1114 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 HMGA1P17096 107 aaKnown RBP19.14■□□□□ 0.65
PTPN11-204ENST00000531326 GPR15P49685 360 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 PLCB2Q00722 1185 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 CYP24A1Q07973 514 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 SMARCB1Q12824 385 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 PAK1Q13153 545 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 SIM2Q14190 667 aaPredicted RBP19.14■□□□□ 0.65
PTPN11-204ENST00000531326 SV2CQ496J9 727 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 HEATR6Q6AI08 1181 aaKnown RBP19.14■□□□□ 0.65
PTPN11-204ENST00000531326 FOXR2Q6PJQ5 311 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 LONP2Q86WA8 852 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 CMTM8Q8IZV2 173 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 STKLD1Q8NE28 680 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 SYAP1Q96A49 352 aaPredicted RBP19.14■□□□□ 0.65
PTPN11-204ENST00000531326 CHFRQ96EP1 664 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 MED15Q96RN5 788 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 TSG101Q99816 390 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 DUSP9Q99956 384 aaKnown RBP19.14■□□□□ 0.65
PTPN11-204ENST00000531326 GZF1Q9H116 711 aaPredicted RBP19.14■□□□□ 0.65
PTPN11-204ENST00000531326 PDE11AQ9HCR9 933 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 CCL26Q9Y258 94 aa19.14■□□□□ 0.65
PTPN11-204ENST00000531326 DCDC2BA2VCK2 349 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 AKAP3O75969 853 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 F11P03951 625 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 RPL13P26373 211 aaKnown RBP19.13■□□□□ 0.65
PTPN11-204ENST00000531326 STX17P56962 302 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 ADAM9Q13443 819 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 TAF12Q16514 161 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 SKOR2Q2VWA4 1001 aaPredicted RBP19.13■□□□□ 0.65
PTPN11-204ENST00000531326 ITPRIPL2Q3MIP1 535 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 CEP135Q66GS9 1140 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 PKN3Q6P5Z2 889 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 RIN3Q8TB24 985 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 PLEKHO2Q8TD55 490 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 FAM84AQ96KN4 292 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 GCNAQ96QF7 691 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 FAM83CQ9BQN1 747 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 HPS4Q9NQG7 708 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 GKN1Q9NS71 199 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 ZNF638Q14966 1978 aaKnown RBP19.13■□□□□ 0.65
PTPN11-204ENST00000531326 RALGAPA1Q6GYQ0 2036 aa19.13■□□□□ 0.65
PTPN11-204ENST00000531326 OTOL1A6NHN0 477 aaPredicted RBP19.12■□□□□ 0.65
PTPN11-204ENST00000531326 POLR2BP30876 1174 aaKnown RBP19.12■□□□□ 0.65
PTPN11-204ENST00000531326 PSMD6Q15008 389 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 NT5DC4Q86YG4 428 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 DCP1BQ8IZD4 617 aaKnown RBP19.12■□□□□ 0.65
PTPN11-204ENST00000531326 PDCL2Q8N4E4 241 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 MAB21L3Q8N8X9 362 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 C1orf127Q8N9H9 656 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 CXorf38Q8TB03 319 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 USP13Q92995 863 aaPredicted RBP19.12■□□□□ 0.65
PTPN11-204ENST00000531326 EEF2KMTQ96G04 330 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 ZNF560Q96MR9 790 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 RTKNQ9BST9 563 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 PI4K2AQ9BTU6 479 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 THG1LQ9NWX6 298 aaKnown RBP19.12■□□□□ 0.65
PTPN11-204ENST00000531326 RWDD2AQ9UIY3 292 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 L1RE1Q9UN81 338 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 PCDHB5Q9Y5E4 795 aa19.12■□□□□ 0.65
PTPN11-204ENST00000531326 PTPRJQ12913 1337 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 BICDL2A1A5D9 508 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 CETN3O15182 167 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 MAPK13O15264 365 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 LRP3O75074 770 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 ITGB3P05106 788 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 HOXA6P31267 233 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 CNR2P34972 360 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 TFAMQ00059 246 aaKnown RBP19.11■□□□□ 0.65
PTPN11-204ENST00000531326 FKBP3Q00688 224 aaKnown RBP19.11■□□□□ 0.65
PTPN11-204ENST00000531326 SURF1Q15526 300 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 SDHAF4Q5VUM1 108 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 TXNDC8Q6A555 127 aa19.11■□□□□ 0.65
PTPN11-204ENST00000531326 TRIM68Q6AZZ1 485 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms