RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SLC7A14Q8TBB6 771 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 SYN2Q92777 582 aaPredicted RBP17.95■□□□□ 0.46
SF3B2-211ENST00000531041 PABPC5Q96DU9 382 aaKnown RBP17.95■□□□□ 0.46
SF3B2-211ENST00000531041 RHOBTB2Q9BYZ6 727 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 CSNK1G1Q9HCP0 422 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 DZANK1Q9NVP4 752 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 TSPAN16Q9UKR8 245 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.95■□□□□ 0.46
SF3B2-211ENST00000531041 INSL5Q9Y5Q6 135 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 MYO16Q9Y6X6 1858 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 NOTCH4Q99466 2003 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 THAP12O43422 761 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 PAPLNO95428 1278 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 KRT9P35527 623 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 PDE6CP51160 858 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 MGAT5BQ3V5L5 792 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 SFMBT2Q5VUG0 894 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.94■□□□□ 0.46
SF3B2-211ENST00000531041 ANKRD52Q8NB46 1076 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 EPS8L1Q8TE68 723 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 SEPT5Q99719 369 aaPredicted RBP17.94■□□□□ 0.46
SF3B2-211ENST00000531041 DUSP16Q9BY84 665 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 KRT82Q9NSB4 513 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 TMEM30AQ9NV96 361 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 ZDHHC7Q9NXF8 308 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 YIPF1Q9Y548 306 aa17.94■□□□□ 0.46
SF3B2-211ENST00000531041 ANAPC1Q9H1A4 1944 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 TRIM66O15016 1216 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 AP1G2O75843 785 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 HNRNPA1P09651 372 aaKnown RBP eCLIP17.93■□□□□ 0.46
SF3B2-211ENST00000531041 FAM200BP0CF97 657 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 HOXB8P17481 243 aaPredicted RBP17.93■□□□□ 0.46
SF3B2-211ENST00000531041 GRIK1P39086 918 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 ALDH1A3P47895 512 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 RPL10AP62906 217 aaKnown RBP17.93■□□□□ 0.46
SF3B2-211ENST00000531041 ARID5AQ03989 594 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 PLD1Q13393 1074 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 ARID5BQ14865 1188 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 PKDCCQ504Y2 493 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 PPM1LQ5SGD2 360 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 NOP9Q86U38 636 aaKnown RBP17.93■□□□□ 0.46
SF3B2-211ENST00000531041 TTC30AQ86WT1 665 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 ZNF677Q86XU0 584 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 DDX1Q92499 740 aaKnown RBP17.93■□□□□ 0.46
SF3B2-211ENST00000531041 C8orf48Q96LL4 319 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 CEP295NLQ96MC4 621 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 DMAP1Q9NPF5 467 aaPredicted RBP17.93■□□□□ 0.46
SF3B2-211ENST00000531041 CLDND1Q9NY35 253 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 HESX1Q9UBX0 185 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 PCDHGC3Q9UN70 934 aa17.93■□□□□ 0.46
SF3B2-211ENST00000531041 SOAT2O75908 522 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 MICAL2O94851 1124 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 LRG1P02750 347 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 NPR3P17342 541 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 ATF6P18850 670 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 HNRNPH3P31942 346 aaKnown RBP17.92■□□□□ 0.46
SF3B2-211ENST00000531041 LTBRP36941 435 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 PRKCIP41743 596 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 CACNA2D1P54289 1103 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 BCAT1P54687 386 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 TWF1Q12792 350 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 CCDC85BQ15834 202 aaPredicted RBP17.92■□□□□ 0.46
SF3B2-211ENST00000531041 ASIC2Q16515 512 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 GOLGA7BQ2TAP0 167 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 E4F1Q66K89 784 aaPredicted RBP17.92■□□□□ 0.46
SF3B2-211ENST00000531041 ANKRD54Q6NXT1 300 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 CLEC20AQ6ZU45 233 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 SCN4BQ8IWT1 228 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 CMASQ8NFW8 434 aaPredicted RBP17.92■□□□□ 0.46
SF3B2-211ENST00000531041 SPATA17Q96L03 361 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 SMOQ99835 787 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 SFXN1Q9H9B4 322 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 CLEC1BQ9P126 229 aa17.92■□□□□ 0.46
SF3B2-211ENST00000531041 NOCTQ9UK39 431 aaKnown RBP17.92■□□□□ 0.46
SF3B2-211ENST00000531041 F8VP50 259 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 MFAP3LO75121 409 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 TBX10O75333 385 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 RFPL2O75678 378 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 BEST1O76090 585 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 POU2F2P09086 479 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 SLC8A3P57103 927 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 BST2Q10589 180 aaKnown RBP17.91■□□□□ 0.46
SF3B2-211ENST00000531041 DDR2Q16832 855 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 CNGA4Q8IV77 575 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 DRC7Q8IY82 874 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 ZMIZ2Q8NF64 920 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 OR8K1Q8NGG5 319 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 KCNK16Q96T55 309 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 DNAJC7Q99615 494 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 UBXN6Q9BZV1 441 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 PNPLA8Q9NP80 782 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 ASB3Q9Y575 518 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 DENND4AQ7Z401 1863 aa17.91■□□□□ 0.46
SF3B2-211ENST00000531041 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.9■□□□□ 0.46
SF3B2-211ENST00000531041 CCDC195A0A1B0GUA6 201 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 SPDYE4A6NLX3 237 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 AKR1B15C9JRZ8 316 aaPredicted RBP17.9■□□□□ 0.46
SF3B2-211ENST00000531041 M0QYV0 167 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 SETSIPP0DME0 302 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 ANXA13P27216 316 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms