RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 PGM1P36871 562 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 VGLL4Q14135 290 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 ARMCX2Q7L311 632 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 NLRP9Q7RTR0 991 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 TMEM130Q8N3G9 435 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 EXD1Q8NHP7 514 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 SLC7A14Q8TBB6 771 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 CCT6BQ92526 530 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 WHRNQ9P202 907 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 TSPAN16Q9UKR8 245 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 LACTBL1A8MY62 500 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 GARSP41250 739 aaKnown RBP12.9□□□□□ -0.34
SCN3B-206ENST00000530277 ALDH5A1P51649 535 aaPredicted RBP12.9□□□□□ -0.34
SCN3B-206ENST00000530277 GEMIN4P57678 1058 aaKnown RBP12.9□□□□□ -0.34
SCN3B-206ENST00000530277 FSTL1Q12841 308 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 ZACNQ401N2 412 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 SPOUT1Q5T280 376 aaKnown RBP12.9□□□□□ -0.34
SCN3B-206ENST00000530277 NAIF1Q69YI7 327 aaPredicted RBP12.9□□□□□ -0.34
SCN3B-206ENST00000530277 MPZL3Q6UWV2 235 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 PDZD4Q76G19 769 aaPredicted RBP12.9□□□□□ -0.34
SCN3B-206ENST00000530277 PPIL6Q8IXY8 311 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 KIAA0319LQ8IZA0 1049 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 OR6P1Q8NGX9 317 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 CLEC4DQ8WXI8 215 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 TJP2Q9UDY2 1190 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 NUDT5Q9UKK9 219 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 ADGRA3Q8IWK6 1321 aa12.9□□□□□ -0.35
SCN3B-206ENST00000530277 RGL2O15211 777 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 UPP2O95045 317 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 ANP32DO95626 131 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 MT-CO1P00395 513 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 GLRBP48167 497 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 TNFAIP2Q03169 654 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 CENPCQ03188 943 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 TAF1BQ53T94 588 aaPredicted RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 JADE1Q6IE81 842 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 LRRC6Q86X45 466 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 FUKQ8N0W3 1084 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 GCOM2Q9BZD3 368 aaPredicted RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 MANSC1Q9H8J5 431 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 ACSS2Q9NR19 701 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 GEMIN8Q9NWZ8 242 aaKnown RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 GTSE1Q9NYZ3 720 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 APOBEC2Q9Y235 224 aaKnown RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 C2orf71A6NGG8 1288 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 ACO1P21399 889 aaKnown RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 RFC5P40937 340 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 CNGA2Q16280 664 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 UBAP2Q5T6F2 1119 aaKnown RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 USP6NLQ92738 828 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 VCXQ9H320 206 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 SPC25Q9HBM1 224 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 SSX2IPQ9Y2D8 614 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 SPDYE16A6NNV3 312 aaPredicted RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 GIPC1O14908 333 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 PSTPIP1O43586 416 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 XPOTO43592 962 aaKnown RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 ABCD1P33897 745 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 NR1H3Q13133 447 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 RABGAP1LQ5R372 815 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 PRAMEF19Q5SWL8 479 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 MAP1SQ66K74 1059 aaPredicted RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 ATG16L1Q676U5 607 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 ZNF677Q86XU0 584 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 XPNPEP1Q9NQW7 623 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 PACSIN3Q9UKS6 424 aa12.89□□□□□ -0.35
SCN3B-206ENST00000530277 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 CICQ96RK0 1608 aaPredicted RBP12.89□□□□□ -0.35
SCN3B-206ENST00000530277 SPECC1L-ADORA2AF8WAN1 911 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 PAX7P23759 505 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 ADCYAP1R1P41586 468 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 VCPP55072 806 aaKnown RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 THOC5Q13769 683 aaKnown RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 TAF5Q15542 800 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 ERMARDQ5T6L9 678 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 TXNRD3NBQ6F5E7 133 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 C16orf46Q6P387 395 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 NUP98P52948 1817 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 A8MUI8 341 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 DNM1LO00429 736 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 HBP1O60381 514 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 CD48P09326 243 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 NQO1P15559 274 aaKnown RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 TPH1P17752 444 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 NOMO3P69849 1222 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 RASSF3Q86WH2 238 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 EDEM1Q92611 657 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 ZNF669Q96BR6 464 aaPredicted RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 FAM193BQ96PV7 902 aaPredicted RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 B3GNT5Q9BYG0 378 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 ASCC2Q9H1I8 757 aaPredicted RBP12.88□□□□□ -0.35
SCN3B-206ENST00000530277 IL1RAPL1Q9NZN1 696 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 DRD4P21917 467 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 EPHB2P29323 1055 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 PTGER2P43116 358 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 PPP1R2P3Q6NXS1 205 aa12.88□□□□□ -0.35
SCN3B-206ENST00000530277 METTL7BQ6UX53 244 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms