RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 CDX4O14627 284 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-216ENST00000529928 ITGB3P05106 788 aa17.24■□□□□ 0.35
COL16A1-216ENST00000529928 HDCP19113 662 aa17.24■□□□□ 0.35
COL16A1-216ENST00000529928 ACAT1P24752 427 aaKnown RBP17.24■□□□□ 0.35
COL16A1-216ENST00000529928 PCSK1P29120 753 aa17.24■□□□□ 0.35
COL16A1-216ENST00000529928 ADSSP30520 456 aa17.24■□□□□ 0.35
COL16A1-216ENST00000529928 LONP1P36776 959 aaKnown RBP17.24■□□□□ 0.35
COL16A1-216ENST00000529928 C2orf27AQ580R0 203 aa17.24■□□□□ 0.35
COL16A1-216ENST00000529928 ZNF720Q7Z2F6 126 aa17.24■□□□□ 0.35
COL16A1-216ENST00000529928 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
COL16A1-216ENST00000529928 CACTINQ8WUQ7 758 aaKnown RBP17.24■□□□□ 0.35
COL16A1-216ENST00000529928 TMEM121BQ9BXQ6 578 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-216ENST00000529928 MMP17Q9ULZ9 603 aa17.24■□□□□ 0.35
COL16A1-216ENST00000529928 ARHGAP26Q9UNA1 814 aa17.24■□□□□ 0.35
COL16A1-216ENST00000529928 C2orf78A6NCI8 922 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 PATE3B3GLJ2 98 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 K7EQS6 105 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 SPINK2P20155 84 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 OPRD1P41143 372 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 LHX1P48742 406 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 DHPSP49366 369 aaPredicted RBP17.23■□□□□ 0.35
COL16A1-216ENST00000529928 IRX4P78413 519 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 CRY1Q16526 586 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 SCN4BQ8IWT1 228 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 C1orf127Q8N9H9 656 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 MDGA1Q8NFP4 955 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 FAM213AQ9BRX8 229 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 LINC00597Q9H2U6 94 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 GDAP2Q9NXN4 497 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 EVLQ9UI08 416 aaPredicted RBP17.23■□□□□ 0.35
COL16A1-216ENST00000529928 ITGA11Q9UKX5 1188 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 EXOC7Q9UPT5 735 aa17.23■□□□□ 0.35
COL16A1-216ENST00000529928 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
COL16A1-216ENST00000529928 PPP1R37O75864 691 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 ALDH1A2O94788 518 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 BMP15O95972 392 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 LDHAP00338 332 aaKnown RBP17.22■□□□□ 0.35
COL16A1-216ENST00000529928 PFKLP17858 780 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 BCKDHBP21953 392 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 DDIT3P35638 169 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 MAGEA11P43364 429 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 SEC13P55735 322 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 LMAN2Q12907 356 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 C4orf50Q6ZRC1 276 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 SFR1Q86XK3 245 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 BRSK2Q8IWQ3 736 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 ADGRF2Q8IZF7 708 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 CSGALNACT2Q8N6G5 542 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 TOP6BLQ8N6T0 577 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 PIGKQ92643 395 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 SCNM1Q9BWG6 230 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 IKZF4Q9H2S9 585 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 SEL1LQ9UBV2 794 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 SNX9Q9Y5X1 595 aa17.22■□□□□ 0.35
COL16A1-216ENST00000529928 THADAQ6YHU6 1953 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 GABRDO14764 452 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 WNT7BP56706 349 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 MRPS21P82921 87 aaKnown RBP17.21■□□□□ 0.35
COL16A1-216ENST00000529928 RABEP1Q15276 862 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 CCDC142Q17RM4 750 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 UAP1L1Q3KQV9 507 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 LMBRD2Q68DH5 695 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-216ENST00000529928 OSTM1Q86WC4 334 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 CCDC33Q8N5R6 958 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 KIAA1958Q8N8K9 716 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 OLIG1Q8TAK6 271 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 GATA6Q92908 595 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 SPACA7Q96KW9 195 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 CEP295NLQ96MC4 621 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 STRA6Q9BX79 667 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 NUSAP1Q9BXS6 441 aaKnown RBP17.21■□□□□ 0.35
COL16A1-216ENST00000529928 RBAKQ9NYW8 714 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-216ENST00000529928 ABCA7Q8IZY2 2146 aa17.21■□□□□ 0.35
COL16A1-216ENST00000529928 HELZP42694 1942 aaKnown RBP17.2■□□□□ 0.34
COL16A1-216ENST00000529928 ANAPC1Q9H1A4 1944 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 MYMKA6NI61 221 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 CD2BP2O95400 341 aaKnown RBP17.2■□□□□ 0.34
COL16A1-216ENST00000529928 KRT19P08727 400 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 RBP5P82980 135 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 HSF5Q4G112 596 aaPredicted RBP17.2■□□□□ 0.34
COL16A1-216ENST00000529928 TRIM61Q5EBN2 209 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 FAM171BQ6P995 826 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 VSTM1Q6UX27 236 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 LPCAT2Q7L5N7 544 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 DPH6Q7L8W6 267 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 DYMQ7RTS9 669 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 TTC30AQ86WT1 665 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 DEFB124Q8NES8 71 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 CXorf38Q8TB03 319 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 WHAMMQ8TF30 809 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 SAAL1Q96ER3 474 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 SPATA17Q96L03 361 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 ACCSQ96QU6 501 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 SLC32A1Q9H598 525 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 MRPL44Q9H9J2 332 aaKnown RBP17.2■□□□□ 0.34
COL16A1-216ENST00000529928 EHD2Q9NZN4 543 aa17.2■□□□□ 0.34
COL16A1-216ENST00000529928 MAGEC2Q9UBF1 373 aaPredicted RBP17.2■□□□□ 0.34
COL16A1-216ENST00000529928 LEFTY2O00292 366 aa17.19■□□□□ 0.34
COL16A1-216ENST00000529928 SLC9A3R1O14745 358 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-216ENST00000529928 TNFRSF10BO14763 440 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms