RNA–Protein interactions for RNA: ENST00000529582.5

LTBP3-214, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,889 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-214ENST00000529582 UPP1Q16831 310 aa24.34■■□□□ 1.49
LTBP3-214ENST00000529582 TTC27Q6P3X3 843 aa24.34■■□□□ 1.49
LTBP3-214ENST00000529582 TMEM110Q86TL2 294 aa24.34■■□□□ 1.49
LTBP3-214ENST00000529582 RTN4RL1Q86UN2 441 aaPredicted RBP24.34■■□□□ 1.49
LTBP3-214ENST00000529582 ARFGAP1Q8N6T3 406 aa24.34■■□□□ 1.49
LTBP3-214ENST00000529582 C12orf50Q8NA57 414 aaPredicted RBP24.34■■□□□ 1.49
LTBP3-214ENST00000529582 B3GALNT2Q8NCR0 500 aa24.34■■□□□ 1.49
LTBP3-214ENST00000529582 GDAP1L1Q96MZ0 367 aa24.34■■□□□ 1.49
LTBP3-214ENST00000529582 PAAF1Q9BRP4 392 aa24.34■■□□□ 1.49
LTBP3-214ENST00000529582 KLHL11Q9NVR0 708 aa24.34■■□□□ 1.49
LTBP3-214ENST00000529582 NFU1Q9UMS0 254 aa24.34■■□□□ 1.49
LTBP3-214ENST00000529582 GABBR2O75899 941 aa24.33■■□□□ 1.49
LTBP3-214ENST00000529582 PTGIRP43119 386 aa24.33■■□□□ 1.49
LTBP3-214ENST00000529582 CDK7P50613 346 aa24.33■■□□□ 1.49
LTBP3-214ENST00000529582 BCAT1P54687 386 aa24.33■■□□□ 1.49
LTBP3-214ENST00000529582 KCTD19Q17RG1 926 aaPredicted RBP24.33■■□□□ 1.49
LTBP3-214ENST00000529582 RCOR2Q8IZ40 523 aa24.33■■□□□ 1.49
LTBP3-214ENST00000529582 SLC2A14Q8TDB8 520 aa24.33■■□□□ 1.49
LTBP3-214ENST00000529582 MAIP1Q8WWC4 291 aa24.33■■□□□ 1.49
LTBP3-214ENST00000529582 PCYOX1Q9UHG3 505 aa24.33■■□□□ 1.49
LTBP3-214ENST00000529582 FAM187AA6NFU0 413 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 DNM1LO00429 736 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 ATP2C2O75185 946 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 RALAP11233 206 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 ACAT1P24752 427 aaKnown RBP24.32■■□□□ 1.48
LTBP3-214ENST00000529582 GRIK3Q13003 919 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 TXNRD3NBQ6F5E7 133 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 EMBQ6PCB8 327 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 DSTYKQ6XUX3 929 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 ANKS1BQ7Z6G8 1248 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 RNF25Q96BH1 459 aaPredicted RBP24.32■■□□□ 1.48
LTBP3-214ENST00000529582 PIWIL1Q96J94 861 aaKnown RBP24.32■■□□□ 1.48
LTBP3-214ENST00000529582 TRIM51Q9BSJ1 452 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 INPP5FQ9Y2H2 1132 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 LRCH4O75427 683 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 KRT1P04264 644 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 PTPN1P18031 435 aaKnown RBP24.32■■□□□ 1.48
LTBP3-214ENST00000529582 TKTP29401 623 aaKnown RBP24.32■■□□□ 1.48
LTBP3-214ENST00000529582 COILP38432 576 aaPredicted RBP24.32■■□□□ 1.48
LTBP3-214ENST00000529582 OLFML1Q6UWY5 402 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 SND1Q7KZF4 910 aaKnown RBP eCLIP24.32■■□□□ 1.48
LTBP3-214ENST00000529582 DDX42Q86XP3 938 aaKnown RBP eCLIP24.32■■□□□ 1.48
LTBP3-214ENST00000529582 TMEM86AQ8N2M4 240 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 LINC01599Q8WXQ3 324 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 SEC14L1Q92503 715 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 RBM41Q96IZ5 413 aaKnown RBP24.32■■□□□ 1.48
LTBP3-214ENST00000529582 HEMGNQ9BXL5 484 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 OSBPL8Q9BZF1 889 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 DDX56Q9NY93 547 aaKnown RBP24.32■■□□□ 1.48
LTBP3-214ENST00000529582 PTPN22Q9Y2R2 807 aa24.32■■□□□ 1.48
LTBP3-214ENST00000529582 C9IYK1 514 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 PI4K2BG5E9Z4 385 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 GPD1P21695 349 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 AARSP49588 968 aaKnown RBP eCLIP24.31■■□□□ 1.48
LTBP3-214ENST00000529582 SNX16P57768 344 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 SLC25A11Q02978 314 aaKnown RBP24.31■■□□□ 1.48
LTBP3-214ENST00000529582 CUL1Q13616 776 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 TRNP1Q6NT89 227 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 CCDC137Q6PK04 289 aaKnown RBP24.31■■□□□ 1.48
LTBP3-214ENST00000529582 EIF1ADQ8N9N8 165 aaKnown RBP24.31■■□□□ 1.48
LTBP3-214ENST00000529582 CAVIN3Q969G5 261 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 SLITRK1Q96PX8 696 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 HNRNPABQ99729 332 aaKnown RBP24.31■■□□□ 1.48
LTBP3-214ENST00000529582 SEZ6LQ9BYH1 1024 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 LRRC19Q9H756 370 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 PAK6Q9NQU5 681 aaPredicted RBP24.31■■□□□ 1.48
LTBP3-214ENST00000529582 UTP11Q9Y3A2 253 aaKnown RBP24.31■■□□□ 1.48
LTBP3-214ENST00000529582 TSC2P49815 1807 aa24.31■■□□□ 1.48
LTBP3-214ENST00000529582 C2CD4BA6NLJ0 364 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 INPPL1O15357 1258 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 PAPSS1O43252 624 aaPredicted RBP24.3■■□□□ 1.48
LTBP3-214ENST00000529582 MYCP01106 439 aaPredicted RBP24.3■■□□□ 1.48
LTBP3-214ENST00000529582 RPL34P49207 117 aaKnown RBP24.3■■□□□ 1.48
LTBP3-214ENST00000529582 ZNF143P52747 638 aaPredicted RBP24.3■■□□□ 1.48
LTBP3-214ENST00000529582 SLC6A3Q01959 620 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 KLF1Q13351 362 aaPredicted RBP24.3■■□□□ 1.48
LTBP3-214ENST00000529582 SMC1AQ14683 1233 aaKnown RBP24.3■■□□□ 1.48
LTBP3-214ENST00000529582 CCDC142Q17RM4 750 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 ZFYVE27Q5T4F4 411 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 LRRC8DQ7L1W4 858 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 POLNQ7Z5Q5 900 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 JAMLQ86YT9 394 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 KRT222Q8N1A0 295 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 C1orf54Q8WWF1 131 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 RXFP2Q8WXD0 754 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 RUNDC3BQ96NL0 473 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 RAB17Q9H0T7 212 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 DDX43Q9NXZ2 648 aaKnown RBP24.3■■□□□ 1.48
LTBP3-214ENST00000529582 SELPP16109 830 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 CETN2P41208 172 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 LHX1P48742 406 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 FNTAP49354 379 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 TUSC3Q13454 348 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 ACAP1Q15027 740 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 TIGD5Q53EQ6 642 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 KIAA0319Q5VV43 1072 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 MFSD7Q6UXD7 560 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 SLC24A5Q71RS6 500 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 SCUBE3Q8IX30 993 aa24.3■■□□□ 1.48
LTBP3-214ENST00000529582 FAM126BQ8IXS8 530 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms