RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 DNAI2Q9GZS0 605 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 SIX2Q9NPC8 291 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 PPANQ9NQ55 473 aaKnown RBP15.41■□□□□ 0.06
NR1H3-231ENST00000529540 RNF19AQ9NV58 838 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 TBC1D13Q9NVG8 400 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 SIX4Q9UIU6 781 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 SLC4A7Q9Y6M7 1214 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 CST3P01034 146 aaPredicted RBP15.41■□□□□ 0.06
NR1H3-231ENST00000529540 CCDC172P0C7W6 258 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 FERP16591 822 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 CDR1P51861 262 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 DSC1Q08554 894 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 BYSLQ13895 437 aaKnown RBP15.41■□□□□ 0.06
NR1H3-231ENST00000529540 ANKRD20A8PQ5CZ79 823 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 DDX42Q86XP3 938 aaKnown RBP eCLIP15.41■□□□□ 0.06
NR1H3-231ENST00000529540 CMTR2Q8IYT2 770 aaKnown RBP15.41■□□□□ 0.06
NR1H3-231ENST00000529540 PPM1KQ8N3J5 372 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 OR2W6PQ8NHA6 318 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 CXorf38Q8TB03 319 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 UBLCP1Q8WVY7 318 aaPredicted RBP15.41■□□□□ 0.06
NR1H3-231ENST00000529540 RAPGEF5Q92565 580 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 SEMA4DQ92854 862 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 SEC16BQ96JE7 1060 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 NIF3L1Q9GZT8 377 aa15.41■□□□□ 0.06
NR1H3-231ENST00000529540 DDX47Q9H0S4 455 aaKnown RBP15.41■□□□□ 0.06
NR1H3-231ENST00000529540 CNOT8Q9UFF9 292 aaKnown RBP15.41■□□□□ 0.06
NR1H3-231ENST00000529540 TBKBP1A7MCY6 615 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 TMEM189-UBE2V1I3L0A0 370 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 PODXLO00592 558 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 DAPK3O43293 454 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 UPP2O95045 317 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 DRD4P21917 467 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 MYL6P60660 151 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 CLUL1Q15846 466 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 UPP1Q16831 310 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 CACNA2D3Q8IZS8 1091 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 AP1M1Q9BXS5 423 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 STK33Q9BYT3 514 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 XYLT2Q9H1B5 865 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 CYP3A43Q9HB55 503 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 MIOSQ9NXC5 875 aa15.4■□□□□ 0.06
NR1H3-231ENST00000529540 NOVA2Q9UNW9 492 aaKnown RBP15.4■□□□□ 0.06
NR1H3-231ENST00000529540 FAM187AA6NFU0 413 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 TMCO5BA8MYB1 307 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 DDX3XO00571 662 aaKnown RBP eCLIP15.39■□□□□ 0.05
NR1H3-231ENST00000529540 DNAJC8O75937 253 aaPredicted RBP15.39■□□□□ 0.05
NR1H3-231ENST00000529540 GJB5O95377 273 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 FAM163BP0C2L3 166 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 DEFB103AP81534 67 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 SOX4Q06945 474 aaPredicted RBP15.39■□□□□ 0.05
NR1H3-231ENST00000529540 QPCTQ16769 361 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 WDR72Q3MJ13 1102 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 WLSQ5T9L3 541 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 DCLRE1AQ6PJP8 1040 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 DPH6Q7L8W6 267 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 HOOK3Q86VS8 718 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 OLIG1Q8TAK6 271 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 ZNF689Q96CS4 500 aaPredicted RBP15.39■□□□□ 0.05
NR1H3-231ENST00000529540 CCDC114Q96M63 670 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 YME1L1Q96TA2 773 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 RAB17Q9H0T7 212 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 CXCL16Q9H2A7 254 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 KDM4CQ9H3R0 1056 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 CENPHQ9H3R5 247 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 UBE2TQ9NPD8 197 aaPredicted RBP15.39■□□□□ 0.05
NR1H3-231ENST00000529540 GDAP2Q9NXN4 497 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 UTP11Q9Y3A2 253 aaKnown RBP15.39■□□□□ 0.05
NR1H3-231ENST00000529540 INSL6Q9Y581 213 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 NUB1Q9Y5A7 615 aa15.39■□□□□ 0.05
NR1H3-231ENST00000529540 MKI67P46013 3256 aaKnown RBP15.39■□□□□ 0.05
NR1H3-231ENST00000529540 CASTOR2A6NHX0 329 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 KPNA7A9QM74 516 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 ALDH2P05091 517 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 NUDT17P0C025 328 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 FLT3P36888 993 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 AFF1P51825 1210 aaKnown RBP15.38■□□□□ 0.05
NR1H3-231ENST00000529540 IFFO1Q0D2I5 559 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 CUL2Q13617 745 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 PHLDB3Q6NSJ2 640 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 COLGALT2Q8IYK4 626 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 SLC30A5Q8TAD4 765 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 SPATA18Q8TC71 538 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 ZBED2Q9BTP6 218 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 COLEC11Q9BWP8 271 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 CXorf56Q9H5V9 222 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 STK39Q9UEW8 545 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 AMACRQ9UHK6 382 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 DNAJC12Q9UKB3 198 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 AMFRQ9UKV5 643 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 TDRD15B5MCY1 1934 aaKnown RBP15.38■□□□□ 0.05
NR1H3-231ENST00000529540 DDX3YO15523 660 aaKnown RBP15.38■□□□□ 0.05
NR1H3-231ENST00000529540 TTI1O43156 1089 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 B3GAT3O94766 335 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 TMEM253P0C7T8 217 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 ATP2A2P16615 1042 aaKnown RBP15.38■□□□□ 0.05
NR1H3-231ENST00000529540 RDXP35241 583 aaKnown RBP15.38■□□□□ 0.05
NR1H3-231ENST00000529540 MAGEA10P43363 369 aaPredicted RBP15.38■□□□□ 0.05
NR1H3-231ENST00000529540 CLCNKBP51801 687 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 LILRA4P59901 499 aa15.38■□□□□ 0.05
NR1H3-231ENST00000529540 MAGOHP61326 146 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms