RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 CEP295NLQ96MC4 621 aa12.93□□□□□ -0.34
SORL1-208ENST00000529445 SNX25Q9H3E2 840 aa12.93□□□□□ -0.34
SORL1-208ENST00000529445 GKN1Q9NS71 199 aa12.93□□□□□ -0.34
SORL1-208ENST00000529445 EXOC1Q9NV70 894 aa12.93□□□□□ -0.34
SORL1-208ENST00000529445 MAGEC2Q9UBF1 373 aaPredicted RBP12.93□□□□□ -0.34
SORL1-208ENST00000529445 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
SORL1-208ENST00000529445 CCL26Q9Y258 94 aa12.93□□□□□ -0.34
SORL1-208ENST00000529445 TRIM66O15016 1216 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 ACTN4O43707 911 aaKnown RBP12.92□□□□□ -0.34
SORL1-208ENST00000529445 EXOC3O60645 756 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 ATP2C2O75185 946 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 TACC1O75410 805 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 PAPSS2O95340 614 aaPredicted RBP12.92□□□□□ -0.34
SORL1-208ENST00000529445 STAU1O95793 577 aaKnown RBP12.92□□□□□ -0.34
SORL1-208ENST00000529445 CKMP06732 381 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 USP17L7P0C7H9 530 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 LMO2P25791 158 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 ANXA13P27216 316 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 PDE6CP51160 858 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 FOXK2Q01167 660 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 AMPD2Q01433 879 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 SATB1Q01826 763 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 CYP27A1Q02318 531 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 FAM160A1Q05DH4 1040 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 TRPC3Q13507 836 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 CCINQ13939 588 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 GAS6Q14393 721 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 PDGFRLQ15198 375 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 Q6ZS52 159 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 SYNPOQ8N3V7 929 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 MYCBPAPQ8TBZ2 947 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 SYAP1Q96A49 352 aaPredicted RBP12.92□□□□□ -0.34
SORL1-208ENST00000529445 SPATA17Q96L03 361 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 FAM83CQ9BQN1 747 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 TRPC7Q9HCX4 862 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 CRTAC1Q9NQ79 661 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 RBM12Q9NTZ6 932 aaKnown RBP12.92□□□□□ -0.34
SORL1-208ENST00000529445 EHD2Q9NZN4 543 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 USP25Q9UHP3 1055 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 SERTAD1Q9UHV2 236 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 RAB23Q9ULC3 237 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 SPAG17Q6Q759 2223 aa12.92□□□□□ -0.34
SORL1-208ENST00000529445 PHACTR2O75167 634 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 MYL1P05976 194 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 PDGFRBP09619 1106 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 FAM163BP0C2L3 166 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 PFKFB1P16118 471 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 BDNFP23560 247 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 ATICP31939 592 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 GNL1P36915 607 aaPredicted RBP12.91□□□□□ -0.34
SORL1-208ENST00000529445 GRIK1P39086 918 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 AP3M2P53677 418 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 USP4Q13107 963 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 PSMD2Q13200 908 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 RUNX3Q13761 415 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 KCNB1Q14721 858 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 MTF1Q14872 753 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 WDR72Q3MJ13 1102 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 MDH1BQ5I0G3 518 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 WDR44Q5JSH3 913 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 ERMP1Q7Z2K6 904 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 DCLK2Q8N568 766 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 GPR161Q8N6U8 529 aaKnown RBP12.91□□□□□ -0.34
SORL1-208ENST00000529445 OR6B3Q8NGW1 331 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 EXOC4Q96A65 974 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 PAGE5Q96GU1 130 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 PCED1BQ96HM7 432 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 SPATA32Q96LK8 384 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 MRPL45Q9BRJ2 306 aaKnown RBP12.91□□□□□ -0.34
SORL1-208ENST00000529445 EBF3Q9H4W6 596 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 HPS4Q9NQG7 708 aa12.91□□□□□ -0.34
SORL1-208ENST00000529445 MYH10P35580 1976 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 KIAA1549LQ6ZVL6 1849 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 ATG2BQ96BY7 2078 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 KLRC4O43908 158 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 CLSTN1O94985 981 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 CST3P01034 146 aaPredicted RBP12.9□□□□□ -0.34
SORL1-208ENST00000529445 PFKLP17858 780 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 CMA1P23946 247 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 MYL6P60660 151 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 KRT85P78386 507 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 GRSF1Q12849 480 aaKnown RBP eCLIP12.9□□□□□ -0.34
SORL1-208ENST00000529445 BIRC3Q13489 604 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 ZNF77Q15935 545 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 ZNF699Q32M78 642 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 TRIM68Q6AZZ1 485 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 DENND5BQ6ZUT9 1274 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 SLC9A9Q8IVB4 645 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 CPA6Q8N4T0 437 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 KIAA0895Q8NCT3 520 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 RIN3Q8TB24 985 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 ATP2A3Q93084 1043 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 ELOVL4Q9GZR5 314 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 GZF1Q9H116 711 aaPredicted RBP12.9□□□□□ -0.34
SORL1-208ENST00000529445 XYLT2Q9H1B5 865 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 NXF1Q9UBU9 619 aaKnown RBP12.9□□□□□ -0.34
SORL1-208ENST00000529445 GMEB2Q9UKD1 530 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 MYO16Q9Y6X6 1858 aa12.9□□□□□ -0.34
SORL1-208ENST00000529445 RALGAPA1Q6GYQ0 2036 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 ATP8B3O60423 1300 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms