RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 HOXA9P31269 272 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 ACAP1Q15027 740 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 WDR72Q3MJ13 1102 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 LRRC38Q5VT99 294 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 PMF1Q6P1K2 205 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 GPRIN1Q7Z2K8 1008 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 PPFIBP1Q86W92 1011 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 SEC14L1Q92503 715 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 SECISBP2LQ93073 1101 aaKnown RBP8.32□□□□□ -1.08
SORL1-207ENST00000528339 CYFIP2Q96F07 1278 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 PCED1BQ96HM7 432 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 PIWIL1Q96J94 861 aaKnown RBP8.32□□□□□ -1.08
SORL1-207ENST00000528339 THAP2Q9H0W7 228 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 EYSQ5T1H1 3165 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 RANBP2P49792 3224 aaKnown RBP8.32□□□□□ -1.08
SORL1-207ENST00000528339 GOLGA6L9A6NEM1 432 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 CYB561D2O14569 222 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 ATF6P18850 670 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 TUBP50607 506 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 AFMIDQ63HM1 303 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 FUT10Q6P4F1 479 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 GLB1LQ6UWU2 654 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 ZFRQ96KR1 1074 aaKnown RBP8.32□□□□□ -1.08
SORL1-207ENST00000528339 RAD9AQ99638 391 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 LPIN3Q9BQK8 851 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 TMEM106CQ9BVX2 250 aa8.32□□□□□ -1.08
SORL1-207ENST00000528339 ZNHIT6Q9NWK9 470 aaKnown RBP8.32□□□□□ -1.08
SORL1-207ENST00000528339 PAPSS1O43252 624 aaPredicted RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 HAPLN1P10915 354 aaPredicted RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 ATN1P54259 1190 aaPredicted RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 SMAD3P84022 425 aaKnown RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 NNTQ13423 1086 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 CYP1B1Q16678 543 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 C9orf50Q5SZB4 431 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 ANKS1BQ7Z6G8 1248 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 FAM35AQ86V20 835 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 TCEAL8Q8IYN2 117 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 ZDHHC14Q8IZN3 488 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 C1orf131Q8NDD1 294 aaKnown RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 WDR24Q96S15 920 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 IMPG2Q9BZV3 1241 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 TSGA10Q9BZW7 698 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 FBXW11Q9UKB1 542 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 ESPNB1AK53 854 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 RB1P06400 928 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 KLHL30Q0D2K2 578 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 WDR44Q5JSH3 913 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 VARS2Q5ST30 1063 aaKnown RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 ALKBH5Q6P6C2 394 aaKnown RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 APPL2Q8NEU8 664 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 TMEM51Q9NW97 253 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 TFR2Q9UP52 801 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 MYBPHLA2RUH7 354 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 H3BNC9 293 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 ATP2C2O75185 946 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 POMCP01189 267 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 P4HA1P13674 534 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 BRD2P25440 801 aaKnown RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 MAGEA10P43363 369 aaPredicted RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 BRCC3P46736 316 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 CLCN4P51793 760 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 TAP1Q03518 808 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 BST2Q10589 180 aaKnown RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 KLHDC10Q6PID8 442 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 KCNT2Q6UVM3 1135 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 POLNQ7Z5Q5 900 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 PPM1KQ8N3J5 372 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 C12orf29Q8N999 325 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 C12orf50Q8NA57 414 aaPredicted RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 RNF169Q8NCN4 708 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 SPPL3Q8TCT6 385 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 URGCPQ8TCY9 931 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 SLC39A13Q96H72 371 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 NPY6RQ99463 290 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 IL21Q9HBE4 155 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 WDR6Q9NNW5 1121 aaKnown RBP8.31□□□□□ -1.08
SORL1-207ENST00000528339 MTMR10Q9NXD2 777 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 TSPAN16Q9UKR8 245 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 SCML2Q9UQR0 700 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 SF3B1O75533 1304 aaKnown RBP eCLIP8.31□□□□□ -1.08
SORL1-207ENST00000528339 TICRRQ7Z2Z1 1910 aa8.31□□□□□ -1.08
SORL1-207ENST00000528339 WDR27A2RRH5 827 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 MTMR11A4FU01 709 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 TP73O15350 636 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 ADAM12O43184 909 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 CTIFO43310 598 aaKnown RBP8.3□□□□□ -1.08
SORL1-207ENST00000528339 MOSPD3O75425 235 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 CCDC172P0C7W6 258 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 KRT83P78385 493 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 LRIT3Q3SXY7 679 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 PRSS36Q5K4E3 855 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 TPGS2Q68CL5 300 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 TMEM270Q6UE05 265 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 SCD5Q86SK9 330 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 ZSCAN18Q8TBC5 510 aaPredicted RBP8.3□□□□□ -1.08
SORL1-207ENST00000528339 SLCO2A1Q92959 643 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 DDX23Q9BUQ8 820 aaKnown RBP8.3□□□□□ -1.08
SORL1-207ENST00000528339 KLC2Q9H0B6 622 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 ADAMTS1Q9UHI8 967 aa8.3□□□□□ -1.08
SORL1-207ENST00000528339 RWDD3Q9Y3V2 267 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms