RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 SIX2Q9NPC8 291 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 DLL3Q9NYJ7 618 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 FBXL5Q9UKA1 691 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 NUB1Q9Y5A7 615 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 CEP250Q9BV73 2442 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 ITIH6Q6UXX5 1313 aa18.42■□□□□ 0.54
CCS-204ENST00000526066 ARHGEF37A1IGU5 675 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 FAM163BP0C2L3 166 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 GCNT1Q02742 428 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 WDR72Q3MJ13 1102 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 ZNF852Q6ZMS4 543 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 LIMS2Q7Z4I7 341 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 NPAS3Q8IXF0 933 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 ING5Q8WYH8 240 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 SUSD3Q96L08 255 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 NIF3L1Q9GZT8 377 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 FAM124BQ9H5Z6 455 aaPredicted RBP18.41■□□□□ 0.54
CCS-204ENST00000526066 ZSCAN32Q9NX65 697 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 APEX2Q9UBZ4 518 aa18.41■□□□□ 0.54
CCS-204ENST00000526066 M0QZQ0 153 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 LRG1P02750 347 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 TBXAS1P24557 533 aaPredicted RBP18.4■□□□□ 0.54
CCS-204ENST00000526066 IGFBP6P24592 240 aaPredicted RBP18.4■□□□□ 0.54
CCS-204ENST00000526066 ELF1P32519 619 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 TNNC1P63316 161 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 LMNB2Q03252 620 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 PPP2R5DQ14738 602 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 FIGNQ5HY92 759 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 KLHDC7AQ5VTJ3 777 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 SPOPLQ6IQ16 392 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 ANKS3Q6ZW76 656 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 ENOSF1Q7L5Y1 443 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 DPH6Q7L8W6 267 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 VSTM4Q8IW00 320 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 MAML2Q8IZL2 1156 aaPredicted RBP18.4■□□□□ 0.54
CCS-204ENST00000526066 NEK11Q8NG66 645 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 TATDN2Q93075 761 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 JAKMIP2Q96AA8 810 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 IQCDQ96DY2 449 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 PCMTD1Q96MG8 357 aaPredicted RBP18.4■□□□□ 0.54
CCS-204ENST00000526066 NUP58Q9BVL2 599 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 CYP3A43Q9HB55 503 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 HCFC1R1Q9NWW0 138 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 GDE1Q9NZC3 331 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 MTRRQ9UBK8 725 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 CDV3Q9UKY7 258 aaKnown RBP18.4■□□□□ 0.54
CCS-204ENST00000526066 RAB23Q9ULC3 237 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 SMG5Q9UPR3 1016 aaKnown RBP18.4■□□□□ 0.54
CCS-204ENST00000526066 SNX9Q9Y5X1 595 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 CDY1Q9Y6F8 540 aa18.4■□□□□ 0.54
CCS-204ENST00000526066 CACNA1BQ00975 2339 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 SCN1AP35498 2009 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 PRR5-ARHGAP8B1AHC4 643 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 PRRG1O14668 218 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 ADAM12O43184 909 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 ECI2O75521 394 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 NOL4O94818 638 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 CD72P21854 359 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 CDC25BP30305 580 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 ASPAP45381 313 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 KLK7P49862 253 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 ARHGAP8P85298 464 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 CUL2Q13617 745 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 SPECC1LQ69YQ0 1117 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 DSTYKQ6XUX3 929 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 TOP6BLQ8N6T0 577 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 SPATA18Q8TC71 538 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 SENP8Q96LD8 212 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 EDEM3Q9BZQ6 932 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 GANQ9H2C0 597 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 FAM207AQ9NSI2 230 aaPredicted RBP18.39■□□□□ 0.53
CCS-204ENST00000526066 DNMT3BQ9UBC3 853 aaKnown RBP18.39■□□□□ 0.53
CCS-204ENST00000526066 NXF1Q9UBU9 619 aaKnown RBP18.39■□□□□ 0.53
CCS-204ENST00000526066 GMEB2Q9UKD1 530 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 MTF2Q9Y483 593 aaPredicted RBP18.39■□□□□ 0.53
CCS-204ENST00000526066 VWA8A3KMH1 1905 aa18.39■□□□□ 0.53
CCS-204ENST00000526066 DMXL1Q9Y485 3027 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 CYB561D2O14569 222 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 SYN3O14994 580 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 HUS1O60921 280 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 CLSTN1O94985 981 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 ADCY5O95622 1261 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 CYP11A1P05108 521 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 UCHL3P15374 230 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 FGFR3P22607 806 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 BRCC3P46736 316 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 LRMPQ12912 555 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 ARHGEF19Q8IW93 802 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 PPM1KQ8N3J5 372 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 TTC39CQ8N584 583 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 MCRS1Q96EZ8 462 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 NAA15Q9BXJ9 866 aaKnown RBP18.38■□□□□ 0.53
CCS-204ENST00000526066 FAM126AQ9BYI3 521 aaPredicted RBP18.38■□□□□ 0.53
CCS-204ENST00000526066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.38■□□□□ 0.531e-10■■■■■ 74.5
CCS-204ENST00000526066 DSEQ9UL01 958 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 USP18Q9UMW8 372 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 PCDHB8Q9UN66 801 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 BACE2Q9Y5Z0 518 aa18.38■□□□□ 0.53
CCS-204ENST00000526066 TBC1D4O60343 1298 aa18.37■□□□□ 0.53
CCS-204ENST00000526066 TACC1O75410 805 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms