RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 KIAA0391O15091 583 aaKnown RBP3.76□□□□□ -1.81
CSDE1-208ENST00000524652 MPPED1O15442 326 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 PROM1O43490 865 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 ORC4O43929 436 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 SRGNP10124 158 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 FCER1AP12319 257 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 CNGA1P29973 690 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 FOLR3P41439 243 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 FOXF2Q12947 444 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 KLF1Q13351 362 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-208ENST00000524652 SLC39A6Q13433 755 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 MIGA2Q7L4E1 593 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 GRASPQ7Z6J2 395 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-208ENST00000524652 DEFB132Q7Z7B7 95 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 TBC1D15Q8TC07 691 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 ZNF384Q8TF68 577 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 PIGBQ92521 554 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 UROC1Q96N76 676 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 KLK15Q9H2R5 256 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 INTS13Q9NVM9 706 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 MIS18AQ9NYP9 233 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 SAP30BPQ9UHR5 308 aaKnown RBP3.76□□□□□ -1.81
CSDE1-208ENST00000524652 ASAP1Q9ULH1 1129 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 PRKAB1Q9Y478 270 aa3.76□□□□□ -1.81
CSDE1-208ENST00000524652 SCN7AQ01118 1682 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 KAT6AQ92794 2004 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 PRAMEF33A0A0G2JMD5 474 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 LRRC3CA6NJW4 275 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 ERVV-2B6SEH9 535 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 YY2O15391 372 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 SGTAO43765 313 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 PRAMEF10O60809 474 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 CLSTN1O94985 981 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 ZNF853P0CG23 659 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 KCNA2P16389 499 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 KRTAP10-11P60412 298 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 KRT24Q2M2I5 525 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 C1orf141Q5JVX7 400 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 GIMAP6Q6P9H5 292 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 VWA1Q6PCB0 445 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 CLNKQ7Z7G1 428 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 RHOT1Q8IXI2 618 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 SRRM1Q8IYB3 904 aaKnown RBP3.75□□□□□ -1.81
CSDE1-208ENST00000524652 DCBLD1Q8N8Z6 715 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 COG1Q8WTW3 980 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 TSR2Q969E8 191 aaKnown RBP3.75□□□□□ -1.81
CSDE1-208ENST00000524652 SLC2A13Q96QE2 648 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 TIMP4Q99727 224 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 KMT5AQ9NQR1 393 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 TDP1Q9NUW8 608 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 ARPP21Q9UBL0 812 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-208ENST00000524652 INTUQ9ULD6 942 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 ENTPD2Q9Y5L3 495 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 CACNA1SQ13698 1873 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 PALLDQ8WX93 1383 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 HEG1Q9ULI3 1381 aa3.75□□□□□ -1.81
CSDE1-208ENST00000524652 LAMB2P55268 1798 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 CHL1O00533 1208 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 HTATSF1O43719 755 aaKnown RBP3.74□□□□□ -1.81
CSDE1-208ENST00000524652 MTHFD1P11586 935 aaKnown RBP3.74□□□□□ -1.81
CSDE1-208ENST00000524652 WT1P19544 449 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-208ENST00000524652 TAF1P21675 1872 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 SLC6A4P31645 630 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 EIF4A1P60842 406 aaKnown RBP3.74□□□□□ -1.81
CSDE1-208ENST00000524652 RPS7P62081 194 aaKnown RBP3.74□□□□□ -1.81
CSDE1-208ENST00000524652 CDC42EP1Q00587 391 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 ZNF844Q08AG5 666 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 ITPK1Q13572 414 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 SF3B3Q15393 1217 aaKnown RBP3.74□□□□□ -1.81
CSDE1-208ENST00000524652 EZH2Q15910 746 aaKnown RBP3.74□□□□□ -1.81
CSDE1-208ENST00000524652 PABPC1LQ4VXU2 614 aaKnown RBP3.74□□□□□ -1.81
CSDE1-208ENST00000524652 ZNF790Q6PG37 636 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-208ENST00000524652 SMIM5Q71RC9 77 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 TSPYL6Q8N831 410 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 NRG4Q8WWG1 115 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 ANKS1AQ92625 1134 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 SARAFQ96BY9 339 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 CAMKK2Q96RR4 588 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 PNNQ9H307 717 aaKnown RBP3.74□□□□□ -1.81
CSDE1-208ENST00000524652 TMOD3Q9NYL9 352 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 MYH3P11055 1940 aa3.74□□□□□ -1.81
CSDE1-208ENST00000524652 ZBED9Q6R2W3 1325 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 FANCIQ9NVI1 1328 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 ANKRD31Q8N7Z5 1873 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 TNRC18O15417 2968 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-208ENST00000524652 DDX60Q8IY21 1712 aaKnown RBP3.73□□□□□ -1.81
CSDE1-208ENST00000524652 KIAA1551Q9HCM1 1747 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 GRM6O15303 877 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 AGFG2O95081 481 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 HSP90AB1P08238 724 aaKnown RBP3.73□□□□□ -1.81
CSDE1-208ENST00000524652 HSPA6P17066 643 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 GRIA3P42263 894 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 PIP4K2AP48426 406 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-208ENST00000524652 MAPK10P53779 464 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 SLC16A1P53985 500 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 SOX10P56693 466 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 TEFQ10587 303 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 TARDBPQ13148 414 aaKnown RBP eCLIP3.73□□□□□ -1.81
CSDE1-208ENST00000524652 TAF7Q15545 349 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms