RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 LYPLA2O95372 231 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 IRF1P10914 325 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 CASP2P42575 452 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 ABHD15Q6UXT9 468 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZNF410Q86VK4 478 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 AGR3Q8TD06 166 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 KRT35Q92764 455 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 TMEM106CQ9BVX2 250 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 FOXP3Q9BZS1 431 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 WDCPQ9H6R7 721 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 ACTR5Q9H9F9 607 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 GTSE1Q9NYZ3 720 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 SENP1Q9P0U3 644 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 BTBD7Q9P203 1132 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 NFICP08651 508 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 SKIP12755 728 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 TAC1P20366 129 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 PBX1P40424 430 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 SEC24CP53992 1094 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 MAPRE1Q15691 268 aaKnown RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 IPMKQ8NFU5 416 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 TTC8Q8TAM2 541 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 PABPC3Q9H361 631 aaKnown RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 DDX43Q9NXZ2 648 aaKnown RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 GGT7Q9UJ14 662 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 PHF20L1A8MW92 1017 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 KPNA7A9QM74 516 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 EIF4BP23588 611 aaKnown RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 COBLL1Q53SF7 1204 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 TDRD10Q5VZ19 366 aaKnown RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 ELMSAN1Q6PJG2 1045 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 PPIL6Q8IXY8 311 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 ARRDC4Q8NCT1 418 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 LNX1Q8TBB1 728 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 SH3TC2Q8TF17 1288 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 ARL8AQ96BM9 186 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 GAD1Q99259 594 aa13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 PSMC3IPQ9P2W1 217 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB1-201ENST00000523390 GLTPD2A6NH11 291 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 PDE2AO00408 941 aaPredicted RBP13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 KPNA6O60684 536 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 DCTN3O75935 186 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 ALDH1A1P00352 501 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 ALDH7A1P49419 539 aaKnown RBP13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZNF200P98182 395 aaPredicted RBP13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 CREG2Q8IUH2 290 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 NDUFAF2Q8N183 169 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 SYT15Q9BQS2 421 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 NUF2Q9BZD4 464 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 SMYD3Q9H7B4 428 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZC3H4Q9UPT8 1303 aaKnown RBP13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 SPEF2Q9C093 1822 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 E2F8A0AVK6 867 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 OCRLQ01968 901 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 FASTKD1Q53R41 847 aaKnown RBP13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 IL31Q6EBC2 164 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 TADA2BQ86TJ2 420 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 GANCQ8TET4 914 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 BHMTQ93088 406 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 TMEM169Q96HH4 297 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 WNK4Q96J92 1243 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 AP4E1Q9UPM8 1137 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 LRP6O75581 1613 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 MROH7Q68CQ1 1323 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 TMEM120BA0PK00 339 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 STIP1P31948 543 aaKnown RBP13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 PPARGP37231 505 aaPredicted RBP13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 NCKAP1LP55160 1127 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 BST2Q10589 180 aaKnown RBP13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 DBN1Q16643 649 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 SCUBE3Q8IX30 993 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 MDM1Q8TC05 714 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 SHC3Q92529 594 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 ASIC4Q96FT7 647 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 ATRNL1Q5VV63 1379 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 DIAPH2O60879 1101 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 MICAL2O94851 1124 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 KCNA2P16389 499 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 MAP2K2P36507 400 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 TKTL1P51854 596 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 ARFIP2P53365 341 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZACNQ401N2 412 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 BSNDQ8WZ55 320 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 CCT8L2Q96SF2 557 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 PCDHGC5Q9Y5F6 944 aa13.63□□□□□ -0.23
PCDHGB1-201ENST00000523390 PTENP60484 403 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 MCL1Q07820 350 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 PTK7Q13308 1070 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 DRP2Q13474 957 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 MFSD7Q6UXD7 560 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 PLPPR4Q7Z2D5 763 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 GBP7Q8N8V2 638 aaPredicted RBP13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZNF669Q96BR6 464 aaPredicted RBP13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 ACO2Q99798 780 aaKnown RBP13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 COLEC11Q9BWP8 271 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 APOBEC2Q9Y235 224 aaKnown RBP13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 TNFSF13BQ9Y275 285 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms