RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 KCNK4Q9NYG8 393 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 PAIP2BQ9ULR5 123 aaKnown RBP9.42□□□□□ -0.9
CSMD1-212ENST00000523387 TMCO1Q9UM00 188 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 TBX20Q9UMR3 447 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 A6NJR5 290 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 KBTBD13C9JR72 458 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 AIM2O14862 343 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 RAG1P15918 1043 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 CRKP46108 304 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 NFIL3Q16649 462 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 CDO1Q16878 200 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 ANKRD20A4Q4UJ75 823 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.42□□□□□ -0.9
CSMD1-212ENST00000523387 DEFB107AQ8IZN7 70 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
CSMD1-212ENST00000523387 CMTM5Q96DZ9 223 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 BORCS6Q96GS4 357 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 UBE2OQ9C0C9 1292 aaKnown RBP9.42□□□□□ -0.9
CSMD1-212ENST00000523387 GRIP2Q9C0E4 1043 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 COA1Q9GZY4 146 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 DNAJC16Q9Y2G8 782 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 CICQ96RK0 1608 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-212ENST00000523387 SMIM31A0A1B0GVY4 71 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 PRR5-ARHGAP8B1AHC4 643 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 ECE2O60344 883 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 PROCP04070 461 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 CIITAP33076 1130 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 PSMC1P62191 440 aaKnown RBP9.42□□□□□ -0.9
CSMD1-212ENST00000523387 ARHGAP8P85298 464 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 PIGHQ14442 188 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-212ENST00000523387 KRT72Q14CN4 511 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 SLC5A9Q2M3M2 681 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 CYP4A22Q5TCH4 519 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 SLC26A11Q86WA9 606 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 GLIS1Q8NBF1 620 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 ZSWIM2Q8NEG5 633 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 NAT14Q8WUY8 206 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 MSTO1Q9BUK6 570 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 WDR18Q9BV38 432 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 SNED1Q8TER0 1413 aa9.42□□□□□ -0.9
CSMD1-212ENST00000523387 UBAP1LF5GYI3 381 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 F5H423 210 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 F8VP50 259 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 H0YCG3 227 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 TRAFD1O14545 582 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 EDIL3O43854 480 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 TM7SF2O76062 418 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 SAT1P21673 171 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 TBXAS1P24557 533 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 CHN2P52757 468 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 ADARP55265 1226 aaKnown RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 PSMC5P62195 406 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 UBAP2LQ14157 1087 aaKnown RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 MTERF2Q49AM1 385 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 CMPK2Q5EBM0 449 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 OR52E8Q6IFG1 317 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 RBM44Q6ZP01 1051 aaKnown RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 LENG1Q96BZ8 264 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 PREBQ9HCU5 417 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 RBAKQ9NYW8 714 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 EPS15L1Q9UBC2 864 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 F8W8V4 182 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 XPO1O14980 1071 aaKnown RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 C6orf222P0C671 652 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 RARBP10826 455 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 KRT3P12035 628 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 OSBPP22059 807 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 IVDP26440 423 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 GTF2H1P32780 548 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 HIRAP54198 1017 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 CDH6P55285 790 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 TFAMQ00059 246 aaKnown RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 MAMLD1Q13495 774 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 SLC44A4Q53GD3 710 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 EFHC2Q5JST6 749 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 ARHGEF16Q5VV41 709 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 B3GNT6Q6ZMB0 384 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 ANKS1BQ7Z6G8 1248 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 EFCAB3Q8N7B9 438 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 JADE3Q92613 823 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 PPP1R36Q96LQ0 422 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 SLITRK1Q96PX8 696 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 MRPL1Q9BYD6 325 aaKnown RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 ASB3Q9Y575 518 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 TCP10L2B9ZVM9 353 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 IRF6O14896 467 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 STRNO43815 780 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 MAGEC1O60732 1142 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 SPAG6O75602 509 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 PSMD10O75832 226 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 TMEM191BP0C7N4 346 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 RARRES1P49788 294 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 CCDC14Q49A88 953 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 DPY19L2P1Q6NXN4 242 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 NRG4Q8WWG1 115 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 ATP6V0A1Q93050 837 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 DNAJC1Q96KC8 554 aaKnown RBP9.41□□□□□ -0.9
CSMD1-212ENST00000523387 RIT2Q99578 217 aa9.41□□□□□ -0.9
CSMD1-212ENST00000523387 CCT7Q99832 543 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms