RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 CRTAC1Q9NQ79 661 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 OBP2AQ9NY56 170 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 UXTQ9UBK9 157 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 CDH9Q9ULB4 789 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 RAB23Q9ULC3 237 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 TICRRQ7Z2Z1 1910 aa10.95□□□□□ -0.66
CTNNA1-235ENST00000522730 TRAV19A0A0A6YYK7 116 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 PVALEFA0A1B0GWK0 134 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 NOL4O94818 638 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 USP17L7P0C7H9 530 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 SLFN14P0C7P3 912 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 HDCP19113 662 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 WARSP23381 471 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 DDX6P26196 483 aaKnown RBP eCLIP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 HOXC13P31276 330 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 MLLT6P55198 1093 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 MYL6P60660 151 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 DMWDQ09019 674 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 IFRD2Q12894 506 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 SRSF5Q13243 272 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 KNOP1Q1ED39 458 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 DGKKQ5KSL6 1271 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 ATL3Q6DD88 541 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 CNNM4Q6P4Q7 775 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 FAM171BQ6P995 826 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 C1orf228Q6PIY5 440 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 SPEM1Q8N4L4 309 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 ARL14EPQ8N8R7 260 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 FSIP1Q8NA03 581 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 ZBTB44Q8NCP5 570 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 LEO1Q8WVC0 666 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 MSANTD3Q96H12 275 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 MS4A3Q96HJ5 214 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 SPATA32Q96LK8 384 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 SLC22A12Q96S37 553 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 PRMT8Q9NR22 394 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 EXOC1Q9NV70 894 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 C2orf42Q9NWW7 574 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 DUS2Q9NX74 493 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 ZMYM5Q9UJ78 669 aa10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 SMG5Q9UPR3 1016 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-235ENST00000522730 OTOGLQ3ZCN5 2332 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 C2orf78A6NCI8 922 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 OTOL1A6NHN0 477 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 A8MXQ7 604 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 CLDN5O00501 218 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 PFKFB1P16118 471 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 PTPN1P18031 435 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 WEE1P30291 646 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 IFNAR2P48551 515 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 PXNP49023 591 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 GALK1P51570 392 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 CDH8P55286 799 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 SNRPFP62306 86 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 GRSF1Q12849 480 aaKnown RBP eCLIP10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 STK4Q13043 487 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 PSMD2Q13200 908 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 KCNB1Q14721 858 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 MAPRE1Q15691 268 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 KMT5BQ4FZB7 885 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 CFAP221Q4G0U5 840 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 WDR44Q5JSH3 913 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 SCARA5Q6ZMJ2 495 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 MYCBPAPQ8TBZ2 947 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 SPATA18Q8TC71 538 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 RMDN1Q96DB5 314 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 PCED1BQ96HM7 432 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 FUBP3Q96I24 572 aaKnown RBP eCLIP10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 FAM83CQ9BQN1 747 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 MED10Q9BTT4 135 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 FAM126AQ9BYI3 521 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 DPEP3Q9H4B8 488 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 HPS4Q9NQG7 708 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 POLR3BQ9NW08 1133 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 TRPM5Q9NZQ8 1165 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 USP18Q9UMW8 372 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 WNT6Q9Y6F9 365 aa10.93□□□□□ -0.66
CTNNA1-235ENST00000522730 UBE4BO95155 1302 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 F8VP50 259 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 SCAMP3O14828 347 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 HRO43593 1189 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 ACTN4O43707 911 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 LILRB5O75023 590 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 TADA3O75528 432 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 CMA1P23946 247 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 MAGEA11P43364 429 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 RAP1GAPP47736 663 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 USP46P62068 366 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 AMPD2Q01433 879 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 EHHADHQ08426 723 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 SIM2Q14190 667 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 MTF1Q14872 753 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 PDGFRLQ15198 375 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 RSPO4Q2I0M5 234 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 CEP135Q66GS9 1140 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 NAIF1Q69YI7 327 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 DENND5BQ6ZUT9 1274 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 CEP68Q76N32 757 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 RIN3Q8TB24 985 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms